RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 MNTQ99583 582 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 HOPXQ9BPY8 73 aaPredicted RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 KCTD14Q9BQ13 255 aaPredicted RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 FAM110AQ9BQ89 295 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 KLHDC3Q9BQ90 382 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 ANKRD60Q9BZ19 345 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 OR2B2Q9GZK3 357 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 MFFQ9GZY8 342 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 DNTTIP1Q9H147 329 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 TMEM38AQ9H6F2 299 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 AUNIPQ9H7T9 357 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 BCL2L10Q9HD36 194 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 CMTM6Q9NX76 183 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 PTTG3PQ9NZH4 202 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 RPS6KB2Q9UBS0 482 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 ERRFI1Q9UJM3 462 aaPredicted RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 ICAM5Q9UMF0 924 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 ZNF835Q9Y2P0 537 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 MEMO1Q9Y316 297 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 MRPS18CQ9Y3D5 142 aaKnown RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 CHST2Q9Y4C5 530 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 DMRT1Q9Y5R6 373 aa2.43□□□□□ -2.02
SKP1-204ENST00000517691 UBR5O95071 2799 aaPredicted RBP2.43□□□□□ -2.02
SKP1-204ENST00000517691 FLNCQ14315 2725 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 A0A1W2PPK0 400 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 A1L4Q6 167 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 SLC22A20A6NK97 555 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 GJE1A6NN92 205 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 A6NNC1 897 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 MCIDASD6RGH6 385 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 FXYD1O00168 92 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 VCYO14598 125 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ADAM10O14672 748 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 TNFSF11O14788 317 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 XRCC3O43542 346 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 CXCL13O43927 109 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 TPST1O60507 370 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 WDR1O75083 606 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 CRTAPO75718 401 aaPredicted RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 SYNGR4O95473 234 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ZNF682O95780 498 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 IFNA14P01570 189 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 HOXD4P09016 255 aaPredicted RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 ETS2P15036 469 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ZNF17P17021 662 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 CXCR1P25024 350 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 TACR3P29371 465 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 PTGER4P35408 488 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 APOBEC1P41238 236 aaKnown RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 CEBPDP49716 269 aaPredicted RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 LHX2P50458 406 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 GZMMP51124 257 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ARHGDIAP52565 204 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 CLDN20P56880 219 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 NUP107P57740 925 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 B3GALT5-AS1P59052 145 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 NCALDP61601 193 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 EEF1A1P68104 462 aaKnown RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 CRYZQ08257 329 aaKnown RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 SSX2Q16385 188 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 BCL2A1Q16548 175 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 PNLIPRP3Q17RR3 467 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ZSWIM7Q19AV6 140 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ACSF3Q4G176 576 aaPredicted RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 HBMQ6B0K9 141 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 Q6ZRM9 215 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 TRPM8Q7Z2W7 1104 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ZNF550Q7Z398 422 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 GDF7Q7Z4P5 450 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ARPINQ7Z6K5 226 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 MRGPRGQ86SM5 289 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 CCDC71Q8IV32 467 aaPredicted RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 MICU2Q8IYU8 434 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 DEFB107AQ8IZN7 70 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 SELENOHQ8IZQ5 122 aaKnown RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 LRRC75A-AS1Q8N1F1 130 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ARHGAP24Q8N264 748 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 GTPBP8Q8N3Z3 284 aaPredicted RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 RPRMLQ8N4K4 120 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 OR52E4Q8NGH9 312 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 VANGL1Q8TAA9 524 aaPredicted RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 SSC4DQ8WTU2 575 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 CA5BP1Q8WTZ4 195 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ST8SIA1Q92185 356 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 RND1Q92730 232 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 PROX1Q92786 737 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 RPL3LQ92901 407 aaKnown RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 EMG1Q92979 244 aaKnown RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 MCUR1Q96AQ8 359 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 R3HDM4Q96D70 268 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ZC3HAV1LQ96H79 300 aaKnown RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 OR5B2Q96R09 309 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 PRR25Q96S07 402 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 TTYH2Q9BSA4 534 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 CHRDL1Q9BU40 450 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 AMBRA1Q9C0C7 1298 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 TMEM27Q9HBJ8 222 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 SPAG4Q9NPE6 437 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 TIGARQ9NQ88 270 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 CTPS2Q9NRF8 586 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms