RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 ACSM4P0C7M7 580 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 OR2T7P0C7T2 308 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 PIPP12273 146 aaPredicted RBP8.54□□□□□ -1.04
CLN8-202ENST00000517514 CRHBPP24387 322 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 STOMP27105 288 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 HTR5AP47898 357 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 ETV1P50549 477 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 SLC35A2P78381 396 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 NKX6-1P78426 367 aaPredicted RBP8.54□□□□□ -1.04
CLN8-202ENST00000517514 POU4F2Q12837 409 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 BEX5Q5H9J7 111 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 LRRN1Q6UXK5 716 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 COLCA1Q6ZS62 124 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 SSX8Q7RTT4 187 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 LHFPL3Q86UP9 236 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 ZNF101Q8IZC7 436 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 KBTBD8Q8NFY9 601 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 OR2AJ1Q8NGZ0 328 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 OR2T27Q8NH04 317 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 PIK3IP1Q96FE7 263 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 OR8B4Q96RC9 309 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 COQ7Q99807 217 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 ATF6BQ99941 703 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 HDHD2Q9H0R4 259 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 KCNN2Q9H2S1 579 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 ZNF319Q9P2F9 582 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 CLEC2DQ9UHP7 191 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 ATPIF1Q9UII2 106 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 BAHCC1Q9P281 2608 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 C5orf49A4QMS7 147 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 TRIM64A6NGJ6 449 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 ZNF878C9JN71 531 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 ABCD4O14678 606 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 TMCC2O75069 709 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 PNPP00491 289 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 CCDC159P0C7I6 412 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 PRF1P14222 555 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 PAX7P23759 505 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 PTAFRP25105 342 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 C21orf33P30042 268 aaPredicted RBP8.53□□□□□ -1.04
CLN8-202ENST00000517514 ERVS71-1P61550 626 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 ST3GAL4Q11206 333 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 IRF3Q14653 427 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 CDONQ4KMG0 1287 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 KLHL22Q53GT1 634 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 ZNF787Q6DD87 383 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 ADAM5Q6NVV9 412 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 ZNF322Q6U7Q0 402 aaPredicted RBP8.53□□□□□ -1.04
CLN8-202ENST00000517514 TMEM108Q6UXF1 575 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 RFPL4BQ6ZWI9 263 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 RHOUQ7L0Q8 258 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 ACBD7Q8N6N7 88 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 ZNF485Q8NCK3 441 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 OR10H4Q8NGA5 316 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 PPP1R14AQ96A00 147 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 MNTQ99583 582 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 ISG20L2Q9H9L3 353 aaKnown RBP8.53□□□□□ -1.04
CLN8-202ENST00000517514 ELOVL3Q9HB03 270 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 CENPMQ9NSP4 180 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 ERVK13-1Q9NX77 482 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 CNOT2Q9NZN8 540 aaKnown RBP8.53□□□□□ -1.04
CLN8-202ENST00000517514 ERVK-18Q9QC07 812 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 LAMP5Q9UJQ1 280 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 DIMT1Q9UNQ2 313 aaKnown RBP8.53□□□□□ -1.04
CLN8-202ENST00000517514 LRP12Q9Y561 859 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 ASH1LQ9NR48 2969 aaKnown RBP8.53□□□□□ -1.04
CLN8-202ENST00000517514 PDZD2O15018 2839 aa8.53□□□□□ -1.04
CLN8-202ENST00000517514 IQCMA0A1B0GVH7 501 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 EFCAB10A6NFE3 127 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 SNTNA6NMZ2 147 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 E7EQL1 145 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 ZNF670-ZNF695F2Z2N8 137 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 F5H5K5 113 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 CASKO14936 926 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 GPRIN2O60269 458 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 SMPD2O60906 423 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 CTAG2O75638 210 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 LALBAP00709 142 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 MT-ND2P03891 347 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 CDK1P06493 297 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 COX6B1P14854 86 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 APLNRP35414 380 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 GDI2P50395 445 aaKnown RBP8.52□□□□□ -1.05
CLN8-202ENST00000517514 PRKXP51817 358 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 OR12D2P58182 307 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 PLP2Q04941 152 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 MFGE8Q08431 387 aaPredicted RBP8.52□□□□□ -1.05
CLN8-202ENST00000517514 ECH1Q13011 328 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 MED21Q13503 144 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 GALEQ14376 348 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 TP53I3Q53FA7 332 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 RBM48Q5RL73 367 aaKnown RBP8.52□□□□□ -1.05
CLN8-202ENST00000517514 PLEKHG7Q6ZR37 379 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 AHSA2Q719I0 299 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 ZNF679Q8IYX0 411 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 ALDH16A1Q8IZ83 802 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 ZNF786Q8N393 782 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 ZNF540Q8NDQ6 660 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 IL17RDQ8NFM7 739 aa8.52□□□□□ -1.05
CLN8-202ENST00000517514 TMEM171Q8WVE6 324 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms