RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 RPP14O95059 124 aaKnown RBP4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 APOL3O95236 402 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 IGKV3-15P01624 115 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 IGLV1-44P01699 117 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 SCG5P05408 212 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 CELA3BP08861 270 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 RPSAP08865 295 aaKnown RBP4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 HTR1AP08908 422 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 MMP7P09237 267 aaPredicted RBP4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 GNAO1P09471 354 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 FAM157BP0CG42 384 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 CCL2P13500 99 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 SELEP16581 610 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ZNF14P17017 642 aaPredicted RBP4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ZNF19P17023 458 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 IGFBP2P18065 325 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 SLC2A5P22732 501 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 NR4A1P22736 598 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 CFL1P23528 166 aaKnown RBP4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 DCKP27707 260 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 PCSK6P29122 969 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 RPS27P42677 84 aaKnown RBP4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 CX3CR1P49238 355 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 GBX2P52951 348 aaPredicted RBP4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 HCCSP53701 268 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 UCP2P55851 309 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ISL1P61371 349 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 PPP1CBP62140 327 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 SNRPD2P62316 118 aaKnown RBP4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 EFNB1P98172 346 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 EGR3Q06889 387 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 MRPL28Q13084 256 aaKnown RBP4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 GGTLC2Q14390 218 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 TIGD6Q17RP2 521 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 NKPD1Q17RQ9 610 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 GFOD2Q3B7J2 385 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 CCDC92Q53HC0 331 aaPredicted RBP4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 RBM48Q5RL73 367 aaKnown RBP4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 C6orf141Q5SZD1 244 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 BCL2L15Q5TBC7 163 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 LINC01590Q5TEZ4 76 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 AGAP6Q5VW22 663 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 RGS7BPQ6MZT1 257 aaPredicted RBP4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 LYPD4Q6UWN0 246 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 DRAM2Q6UX65 266 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 LRRN1Q6UXK5 716 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 CFAP77Q6ZQR2 320 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 AHSA2Q719I0 299 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 RHOUQ7L0Q8 258 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 MRPL21Q7Z2W9 205 aaKnown RBP4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 CDC20BQ86Y33 519 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ZNF679Q8IYX0 411 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 KLHL36Q8N4N3 616 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 FGFBP3Q8TAT2 258 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 SYNPRQ8TBG9 265 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 TMEM171Q8WVE6 324 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ZNRF4Q8WWF5 429 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 AKAP1Q92667 903 aaKnown RBP eCLIP4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 FBXW5Q969U6 566 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 APOBEC3DQ96AK3 386 aaPredicted RBP4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 LGALS12Q96DT0 336 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 C14orf79Q96F83 325 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ZNF799Q96GE5 643 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 POM121L2Q96KW2 1035 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 DHRS9Q9BPW9 319 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 YTHDF1Q9BYJ9 559 aaKnown RBP4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ANKRD60Q9BZ19 345 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 TTTY10Q9BZA0 68 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 PLK3Q9H4B4 646 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ADGRL4Q9HBW9 690 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 NOX3Q9HBY0 568 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 VCX3AQ9NNX9 186 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 DYNLRB1Q9NP97 96 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 CNOT2Q9NZN8 540 aaKnown RBP4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 NPAP1Q9NZP6 1156 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 CRNNQ9UBG3 495 aaPredicted RBP4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 AASSQ9UDR5 926 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 DUSP13Q9UII6 198 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ERGIC3Q9Y282 383 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 TENM4Q6N022 2769 aa4.73□□□□□ -1.65
SCARNA16.4-201ENST00000516956 DIDO1Q9BTC0 2240 aaKnown RBP4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 TMEM269A0A1B0GVZ9 245 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 A0A1W2PQL4 384 aaPredicted RBP4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 GGT3PA6NGU5 568 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 ACOD1A6NK06 481 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 DEFB108AA8MXU0 73 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 LOC110117498-PIK3R3F6TDL0 507 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 J3QW42 95 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 PSMD9O00233 223 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 SLC1A7O00341 560 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 HS3ST1O14792 307 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 XRCC2O43543 280 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 DENRO43583 198 aaKnown RBP4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 RGS10O43665 173 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 SYNGR3O43761 229 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 TIMM8AO60220 97 aaPredicted RBP4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 MTRF1O75570 445 aaKnown RBP4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 SULT1C4O75897 302 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 CCDC159P0C7I6 412 aa4.72□□□□□ -1.65
SCARNA16.4-201ENST00000516956 OCM2P0CE71 109 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms