RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	ZNF620	Q6ZNG0	422 aa		13.12	□□□□□ -0.31
LMNA-223	ENST00000515459	MOGAT3	Q86VF5	341 aa		13.12	□□□□□ -0.31
LMNA-223	ENST00000515459	MICU2	Q8IYU8	434 aa		13.12	□□□□□ -0.31
LMNA-223	ENST00000515459	PCYOX1L	Q8NBM8	494 aa		13.12	□□□□□ -0.31
LMNA-223	ENST00000515459	OR5L1	Q8NGL2	311 aa		13.12	□□□□□ -0.31
LMNA-223	ENST00000515459	OR51A7	Q8NH64	312 aa		13.12	□□□□□ -0.31
LMNA-223	ENST00000515459	TSPEAR	Q8WU66	669 aa		13.12	□□□□□ -0.31
LMNA-223	ENST00000515459	C10orf82	Q8WW14	230 aa		13.12	□□□□□ -0.31
LMNA-223	ENST00000515459	RASD2	Q96D21	266 aa		13.12	□□□□□ -0.31
LMNA-223	ENST00000515459	ZNF582	Q96NG8	517 aa	Predicted RBP	13.12	□□□□□ -0.31
LMNA-223	ENST00000515459	TMBIM4	Q9HC24	238 aa		13.12	□□□□□ -0.31
LMNA-223	ENST00000515459	PTTG3P	Q9NZH4	202 aa		13.12	□□□□□ -0.31
LMNA-223	ENST00000515459	KIF17	Q9P2E2	1029 aa		13.12	□□□□□ -0.31
LMNA-223	ENST00000515459	RNF114	Q9Y508	228 aa		13.12	□□□□□ -0.31
LMNA-223	ENST00000515459	TRAV27	A0A087WT01	109 aa		13.11	□□□□□ -0.31
LMNA-223	ENST00000515459	IGHV3-64D	A0A0J9YX35	117 aa		13.11	□□□□□ -0.31
LMNA-223	ENST00000515459		F5H5P2	479 aa		13.11	□□□□□ -0.31
LMNA-223	ENST00000515459		H0YL77	283 aa		13.11	□□□□□ -0.31
LMNA-223	ENST00000515459	TNFRSF13B	O14836	293 aa	Predicted RBP	13.11	□□□□□ -0.31
LMNA-223	ENST00000515459	MLNR	O43193	412 aa		13.11	□□□□□ -0.31
LMNA-223	ENST00000515459	ENSA	O43768	121 aa	Known RBP	13.11	□□□□□ -0.31
LMNA-223	ENST00000515459	IFNA14	P01570	189 aa		13.11	□□□□□ -0.31
LMNA-223	ENST00000515459	SELE	P16581	610 aa		13.11	□□□□□ -0.31
LMNA-223	ENST00000515459	RGS6	P49758	472 aa		13.11	□□□□□ -0.31
LMNA-223	ENST00000515459	KRTAP10-3	P60369	221 aa		13.11	□□□□□ -0.31
LMNA-223	ENST00000515459	TAF9	Q16594	264 aa		13.11	□□□□□ -0.31
LMNA-223	ENST00000515459	FAM201A	Q5SY85	155 aa		13.11	□□□□□ -0.31
LMNA-223	ENST00000515459	RUSC1-AS1	Q66K80	236 aa		13.11	□□□□□ -0.31
LMNA-223	ENST00000515459	DCDC5	Q6ZRR9	648 aa		13.11	□□□□□ -0.31
LMNA-223	ENST00000515459	OAF	Q86UD1	273 aa		13.11	□□□□□ -0.31
LMNA-223	ENST00000515459	OR1F12	Q8NHA8	337 aa		13.11	□□□□□ -0.31
LMNA-223	ENST00000515459	SSMEM1	Q8WWF3	244 aa		13.11	□□□□□ -0.31
LMNA-223	ENST00000515459	DYRK2	Q92630	601 aa		13.11	□□□□□ -0.31
LMNA-223	ENST00000515459	PCGF1	Q9BSM1	259 aa		13.11	□□□□□ -0.31
LMNA-223	ENST00000515459	CDADC1	Q9BWV3	514 aa		13.11	□□□□□ -0.31
LMNA-223	ENST00000515459	GRHPR	Q9UBQ7	328 aa		13.11	□□□□□ -0.31
LMNA-223	ENST00000515459	OR6C6	A6NF89	314 aa		13.1	□□□□□ -0.31
LMNA-223	ENST00000515459	FBP2	O00757	339 aa		13.1	□□□□□ -0.31
LMNA-223	ENST00000515459	AHCYL1	O43865	530 aa		13.1	□□□□□ -0.31
LMNA-223	ENST00000515459	IRF2	P14316	349 aa		13.1	□□□□□ -0.31
LMNA-223	ENST00000515459	IFNA8	P32881	189 aa		13.1	□□□□□ -0.31
LMNA-223	ENST00000515459	FHL1	Q13642	323 aa		13.1	□□□□□ -0.31
LMNA-223	ENST00000515459	CYLC2	Q14093	348 aa	Predicted RBP	13.1	□□□□□ -0.31
LMNA-223	ENST00000515459	NANOGP8	Q6NSW7	305 aa		13.1	□□□□□ -0.31
LMNA-223	ENST00000515459	LYPD2	Q6UXB3	125 aa		13.1	□□□□□ -0.31
LMNA-223	ENST00000515459	ZNF841	Q6ZN19	808 aa		13.1	□□□□□ -0.31
LMNA-223	ENST00000515459	TBC1D15	Q8TC07	691 aa		13.1	□□□□□ -0.31
LMNA-223	ENST00000515459	APOBEC3D	Q96AK3	386 aa	Predicted RBP	13.1	□□□□□ -0.31
LMNA-223	ENST00000515459	PRRC1	Q96M27	445 aa		13.1	□□□□□ -0.31
LMNA-223	ENST00000515459	ECSIT	Q9BQ95	431 aa		13.1	□□□□□ -0.31
LMNA-223	ENST00000515459	ASH2L	Q9UBL3	628 aa		13.1	□□□□□ -0.31
LMNA-223	ENST00000515459	ZNF281	Q9Y2X9	895 aa		13.1	□□□□□ -0.31
LMNA-223	ENST00000515459	TEX13C	A0A0J9YWL9	993 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	SLC22A31	A6NKX4	558 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	IQCF6	A8MYZ5	107 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	EFCAB9	A8MZ26	197 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	C22orf46	C9J442	243 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	P2RY10	O00398	339 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	XKRY	O14609	159 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	CLPX	O76031	633 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	TOX4	O94842	621 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	LIPF	P07098	398 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	SFTPB	P07988	381 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	DBH	P09172	617 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	RPL4	P36578	427 aa	Known RBP	13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	CFHR2	P36980	270 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	PSMB10	P40306	273 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	PMEL	P40967	661 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	GATA4	P43694	442 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	SLC9A3	P48764	834 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	NPY4R	P50391	375 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	LSM6	P62312	80 aa	Known RBP	13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	RABL3	Q5HYI8	236 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	CALHM3	Q86XJ0	350 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	C1QL4	Q86Z23	238 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	NRM	Q8IXM6	262 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	BHLHE23	Q8NDY6	225 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	LINC01006	Q8NI28	216 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	GATAD2B	Q8WXI9	593 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	SH3GL1	Q99961	368 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	TCF7L1	Q9HCS4	588 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	ACOXL	Q9NUZ1	547 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	ATPIF1	Q9UII2	106 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	A4GNT	Q9UNA3	340 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	ADAM18	Q9Y3Q7	739 aa		13.09	□□□□□ -0.31
LMNA-223	ENST00000515459	CENPVL3	A0A0U1RRI6	287 aa		13.08	□□□□□ -0.32
LMNA-223	ENST00000515459	PRSS37	A4D1T9	235 aa		13.08	□□□□□ -0.32
LMNA-223	ENST00000515459	ZNF879	B4DU55	563 aa		13.08	□□□□□ -0.32
LMNA-223	ENST00000515459	CTLA4	P16410	223 aa		13.08	□□□□□ -0.32
LMNA-223	ENST00000515459	FPR3	P25089	353 aa		13.08	□□□□□ -0.32
LMNA-223	ENST00000515459	PRKCD	Q05655	676 aa		13.08	□□□□□ -0.32
LMNA-223	ENST00000515459	CCDC92	Q53HC0	331 aa	Predicted RBP	13.08	□□□□□ -0.32
LMNA-223	ENST00000515459	MEST	Q5EB52	335 aa		13.08	□□□□□ -0.32
LMNA-223	ENST00000515459	OTP	Q5XKR4	325 aa		13.08	□□□□□ -0.32
LMNA-223	ENST00000515459	CD276	Q5ZPR3	534 aa		13.08	□□□□□ -0.32
LMNA-223	ENST00000515459	ERICH5	Q6P6B1	374 aa		13.08	□□□□□ -0.32
LMNA-223	ENST00000515459	OR13C2	Q8NGS9	318 aa		13.08	□□□□□ -0.32
LMNA-223	ENST00000515459	OR11L1	Q8NGX0	322 aa		13.08	□□□□□ -0.32
LMNA-223	ENST00000515459	STON2	Q8WXE9	905 aa		13.08	□□□□□ -0.32
LMNA-223	ENST00000515459	TPD52L3	Q96J77	140 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms