RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 SPATA46Q5T0L3 261 aa10.91□□□□□ -0.66
CLCN3-210ENST00000515420 TMEM179BQ7Z7N9 219 aa10.91□□□□□ -0.66
CLCN3-210ENST00000515420 CYB561A3Q8NBI2 242 aa10.91□□□□□ -0.66
CLCN3-210ENST00000515420 OR5L1Q8NGL2 311 aa10.91□□□□□ -0.66
CLCN3-210ENST00000515420 OR4Q3Q8NH05 313 aa10.91□□□□□ -0.66
CLCN3-210ENST00000515420 APOBEC3DQ96AK3 386 aaPredicted RBP10.91□□□□□ -0.66
CLCN3-210ENST00000515420 SLCO4A1Q96BD0 722 aa10.91□□□□□ -0.66
CLCN3-210ENST00000515420 DUS3LQ96G46 650 aaKnown RBP10.91□□□□□ -0.66
CLCN3-210ENST00000515420 CDADC1Q9BWV3 514 aa10.91□□□□□ -0.66
CLCN3-210ENST00000515420 MRPL22Q9NWU5 206 aaKnown RBP10.91□□□□□ -0.66
CLCN3-210ENST00000515420 ZDHHC8Q9ULC8 765 aa10.91□□□□□ -0.66
CLCN3-210ENST00000515420 GRIP1Q9Y3R0 1128 aa10.91□□□□□ -0.66
CLCN3-210ENST00000515420 H3BN98 237 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 HPXP02790 462 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 RAC2P15153 192 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 ZNF823P16415 610 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 KITLGP21583 273 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 FMO3P31513 532 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 ZNF81P51508 661 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 CHN2P52757 468 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 TMEM33P57088 247 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 CRMP1Q14194 572 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 GGTLC2Q14390 218 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 PCK2Q16822 640 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 TEX30Q5JUR7 227 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 C1orf146Q5VVC0 180 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 SLC27A4Q6P1M0 643 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 SHQ1Q6PI26 577 aaKnown RBP10.9□□□□□ -0.66
CLCN3-210ENST00000515420 FBXW12Q6X9E4 464 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 COLCA1Q6ZS62 124 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 HPS1Q92902 700 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 UTP4Q969X6 686 aaKnown RBP10.9□□□□□ -0.66
CLCN3-210ENST00000515420 ATF6BQ99941 703 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 TMEM160Q9NX00 188 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 COMMD3-BMI1R4GMX3 469 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 TANC2Q9HCD6 1990 aa10.9□□□□□ -0.66
CLCN3-210ENST00000515420 SONP18583 2426 aaKnown RBP10.89□□□□□ -0.67
CLCN3-210ENST00000515420 IGHV4-61A0A0C4DH41 118 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 INAFM1C9JVW0 142 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 RP2O75695 350 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 CD55P08174 381 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 IGHV4-31P0DP07 118 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 OSMP13725 252 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 SPI1P17947 270 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 PAICSP22234 425 aaKnown RBP10.89□□□□□ -0.67
CLCN3-210ENST00000515420 PYCR1P32322 319 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 CRYBB2P43320 205 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 MAGEB1P43366 347 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 CCL8P80075 99 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 PSG7Q13046 419 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 ALKBH6Q3KRA9 238 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 TMEM255AQ5JRV8 349 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 C6orf52Q5T4I8 152 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 OTPQ5XKR4 325 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 CYB5R2Q6BCY4 276 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 CORO6Q6QEF8 472 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 CFAP77Q6ZQR2 320 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.89□□□□□ -0.67
CLCN3-210ENST00000515420 LINC00346Q8IVM7 164 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 PARP8Q8N3A8 854 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 OR9Q1Q8NGQ5 310 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 SLC7A6Q92536 515 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 PTP4A1Q93096 173 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 HAVCR1Q96D42 359 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 PITX2Q99697 317 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 C1QTNF5Q9BXJ0 243 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 TEX12Q9BXU0 123 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 SAP30LQ9HAJ7 183 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 NTN4Q9HB63 628 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 PNRC2Q9NPJ4 139 aaKnown RBP10.89□□□□□ -0.67
CLCN3-210ENST00000515420 DECR2Q9NUI1 292 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 DDX28Q9NUL7 540 aaKnown RBP10.89□□□□□ -0.67
CLCN3-210ENST00000515420 PURGQ9UJV8 347 aaKnown RBP10.89□□□□□ -0.67
CLCN3-210ENST00000515420 STARD10Q9Y365 291 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 MALRD1Q5VYJ5 2156 aa10.89□□□□□ -0.67
CLCN3-210ENST00000515420 A8MV72 311 aaPredicted RBP10.88□□□□□ -0.67
CLCN3-210ENST00000515420 TIMM8AO60220 97 aaPredicted RBP10.88□□□□□ -0.67
CLCN3-210ENST00000515420 LILRA1O75019 489 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 CRLF1O75462 422 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 TIPRLO75663 272 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 IGHV1-46P01743 117 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 HMGN1P05114 100 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 DBHP09172 617 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 FCGR1AP12314 374 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 OTX1P32242 354 aaPredicted RBP10.88□□□□□ -0.67
CLCN3-210ENST00000515420 GPR6P46095 362 aaPredicted RBP10.88□□□□□ -0.67
CLCN3-210ENST00000515420 ENTPD1P49961 510 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 CDK5Q00535 292 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 ATP6AP1Q15904 470 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 RSPO1Q2MKA7 263 aaPredicted RBP10.88□□□□□ -0.67
CLCN3-210ENST00000515420 FAHD1Q6P587 224 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 ASRGL1Q7L266 308 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 HIPK1Q86Z02 1210 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 HS3ST5Q8IZT8 346 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 ATG16L2Q8NAA4 619 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 OR5K1Q8NHB7 308 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 YIPF5Q969M3 257 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 ELMOD3Q96FG2 381 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 MAP6Q96JE9 813 aa10.88□□□□□ -0.67
CLCN3-210ENST00000515420 MARCH7Q9H992 704 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms