RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 EXOSC1Q9Y3B2 195 aaKnown RBP18.21■□□□□ 0.51
LSM6-207ENST00000515311 LOC100509620A0A075B734 347 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 PRR32B1ATL7 298 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 CDK1P06493 297 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 H2BFMP0C1H6 154 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 CD40P25942 277 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 OTX1P32242 354 aaPredicted RBP18.2■□□□□ 0.5
LSM6-207ENST00000515311 ACTA2P62736 377 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 ACTG2P63267 376 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 GALEQ14376 348 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 BEX5Q5H9J7 111 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 ZNF684Q5T5D7 378 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 RNLSQ5VYX0 342 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 PLEKHG7Q6ZR37 379 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 SSX6Q7RTT6 188 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 KRT77Q7Z794 578 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 ZNF679Q8IYX0 411 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 SPTSSAQ969W0 71 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 PSMG3-AS1Q96PY0 264 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 SIGLEC11Q96RL6 698 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 DCLRE1CQ96SD1 692 aaKnown RBP18.2■□□□□ 0.5
LSM6-207ENST00000515311 ZNF649Q9BS31 505 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 MROQ9BYG7 248 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 NIPAL2Q9H841 368 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 KCNN3Q9UGI6 736 aa18.2■□□□□ 0.5
LSM6-207ENST00000515311 SULT1C4O75897 302 aa18.19■□□□□ 0.5
LSM6-207ENST00000515311 ADRA2AP08913 450 aa18.19■□□□□ 0.5
LSM6-207ENST00000515311 LIMS3P0CW19 117 aa18.19■□□□□ 0.5
LSM6-207ENST00000515311 LIMS4P0CW20 117 aa18.19■□□□□ 0.5
LSM6-207ENST00000515311 DCTDP32321 178 aa18.19■□□□□ 0.5
LSM6-207ENST00000515311 NR1H2P55055 460 aa18.19■□□□□ 0.5
LSM6-207ENST00000515311 NAAAQ02083 359 aa18.19■□□□□ 0.5
LSM6-207ENST00000515311 MVKQ03426 396 aa18.19■□□□□ 0.5
LSM6-207ENST00000515311 DAZAP2Q15038 168 aaPredicted RBP18.19■□□□□ 0.5
LSM6-207ENST00000515311 TAF13Q15543 124 aa18.19■□□□□ 0.5
LSM6-207ENST00000515311 RSPO1Q2MKA7 263 aaPredicted RBP18.19■□□□□ 0.5
LSM6-207ENST00000515311 CDONQ4KMG0 1287 aa18.19■□□□□ 0.5
LSM6-207ENST00000515311 LRRN1Q6UXK5 716 aa18.19■□□□□ 0.5
LSM6-207ENST00000515311 SPATC1Q76KD6 591 aa18.19■□□□□ 0.5
LSM6-207ENST00000515311 KCTD20Q7Z5Y7 419 aa18.19■□□□□ 0.5
LSM6-207ENST00000515311 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.19■□□□□ 0.5
LSM6-207ENST00000515311 SNX33Q8WV41 574 aa18.19■□□□□ 0.5
LSM6-207ENST00000515311 KCNJ15Q99712 375 aa18.19■□□□□ 0.5
LSM6-207ENST00000515311 SLCO1C1Q9NYB5 712 aa18.19■□□□□ 0.5
LSM6-207ENST00000515311 IKZF2Q9UKS7 526 aa18.19■□□□□ 0.5
LSM6-207ENST00000515311 LRP12Q9Y561 859 aa18.19■□□□□ 0.5
LSM6-207ENST00000515311 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.18■□□□□ 0.5
LSM6-207ENST00000515311 C5orf49A4QMS7 147 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 DPRXA6NFQ7 191 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 DEFB108AA8MXU0 73 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 HAX1O00165 279 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 RGS10O43665 173 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 ICMTO60725 284 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 GOSR1O95249 250 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 CRYAAP02489 173 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 APOC1P02654 83 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 KRT8P05787 483 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 ZNF35P13682 527 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 C21orf33P30042 268 aaPredicted RBP18.18■□□□□ 0.5
LSM6-207ENST00000515311 ETV1P50549 477 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 CHN2P52757 468 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 BSPH1Q075Z2 132 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 KCTD21Q4G0X4 260 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 NCMAPQ5T1S8 102 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 LHFPL3Q86UP9 236 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 SYS1Q8N2H4 156 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 ALG8Q9BVK2 526 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 CDCA4Q9BXL8 241 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 TTTY10Q9BZA0 68 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 CDH20Q9HBT6 801 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 CHCHD3Q9NX63 227 aaKnown RBP18.18■□□□□ 0.5
LSM6-207ENST00000515311 MRM2Q9UI43 246 aaKnown RBP18.18■□□□□ 0.5
LSM6-207ENST00000515311 ICE1Q9Y2F5 2266 aa18.18■□□□□ 0.5
LSM6-207ENST00000515311 HEATR1Q9H583 2144 aaKnown RBP18.17■□□□□ 0.5
LSM6-207ENST00000515311 IGHV2OR16-5A0A0B4J2B6 119 aa18.17■□□□□ 0.5
LSM6-207ENST00000515311 TRIM64A6NGJ6 449 aa18.17■□□□□ 0.5
LSM6-207ENST00000515311 METTL15A6NJ78 407 aa18.17■□□□□ 0.5
LSM6-207ENST00000515311 MRPS14O60783 128 aaKnown RBP18.17■□□□□ 0.5
LSM6-207ENST00000515311 ABHD16AO95870 558 aa18.17■□□□□ 0.5
LSM6-207ENST00000515311 EEF1B2P24534 225 aaKnown RBP18.17■□□□□ 0.5
LSM6-207ENST00000515311 HSD11B1P28845 292 aa18.17■□□□□ 0.5
LSM6-207ENST00000515311 RIDAP52758 137 aaKnown RBP18.17■□□□□ 0.5
LSM6-207ENST00000515311 TPTEP56180 551 aa18.17■□□□□ 0.5
LSM6-207ENST00000515311 DRAM2Q6UX65 266 aa18.17■□□□□ 0.5
LSM6-207ENST00000515311 PRSS48Q7RTY5 328 aa18.17■□□□□ 0.5
LSM6-207ENST00000515311 FAM220AQ7Z4H9 259 aa18.17■□□□□ 0.5
LSM6-207ENST00000515311 SLC7A6Q92536 515 aa18.17■□□□□ 0.5
LSM6-207ENST00000515311 SGCDQ92629 289 aa18.17■□□□□ 0.5
LSM6-207ENST00000515311 PLPPR2Q96GM1 343 aa18.17■□□□□ 0.5
LSM6-207ENST00000515311 KCNS3Q9BQ31 491 aa18.17■□□□□ 0.5
LSM6-207ENST00000515311 ELOVL3Q9HB03 270 aa18.17■□□□□ 0.5
LSM6-207ENST00000515311 ERVK-18Q9QC07 812 aa18.17■□□□□ 0.5
LSM6-207ENST00000515311 CAB39Q9Y376 341 aaPredicted RBP18.17■□□□□ 0.5
LSM6-207ENST00000515311 DOPEY2Q9Y3R5 2298 aa18.16■□□□□ 0.5
LSM6-207ENST00000515311 TMEM129A0AVI4 362 aa18.16■□□□□ 0.5
LSM6-207ENST00000515311 F5H5K5 113 aa18.16■□□□□ 0.5
LSM6-207ENST00000515311 M0R135 149 aa18.16■□□□□ 0.5
LSM6-207ENST00000515311 PSMD9O00233 223 aa18.16■□□□□ 0.5
LSM6-207ENST00000515311 SIAH2O43255 324 aa18.16■□□□□ 0.5
LSM6-207ENST00000515311 TNFAIP8O95379 198 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms