RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 APCSP02743 223 aa2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 OR56A5P0C7T3 313 aa2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 DTYMKP23919 212 aa2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 U2AF2P26368 475 aaKnown RBP eCLIP2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 STOMP27105 288 aa2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 HCAR3P49019 387 aa2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 P2RX1P51575 399 aa2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 ILKQ13418 452 aa2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 PSMD5Q16401 504 aa2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 CENPQQ7L2Z9 268 aaPredicted RBP2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 CALHM1Q8IU99 346 aa2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 ZNF615Q8N8J6 731 aa2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 CCDC148Q8NFR7 591 aa2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 OR4K5Q8NGD3 323 aa2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 OR6N1Q8NGY5 312 aa2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 OR5K2Q8NHB8 316 aa2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 CAMK2N2Q96S95 79 aa2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 SCRT1Q9BWW7 348 aa2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 ACTR3CQ9C0K3 210 aaPredicted RBP2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 OR52D1Q9H346 318 aa2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 AGPAT4Q9NRZ5 378 aa2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 TRMT112Q9UI30 125 aaKnown RBP2.86□□□□□ -1.95
HMGCS1-207ENST00000514610 IGKV1-8A0A0C4DH67 115 aa2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 TEX46H3BTG2 121 aa2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 NVLO15381 856 aaKnown RBP2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 SOCS1O15524 211 aa2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 MPZL1O95297 269 aa2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 CD160O95971 181 aa2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 CTSLP07711 333 aa2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 ERGP11308 486 aa2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 RAB3AP20336 220 aa2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 MRPL19P49406 292 aaKnown RBP2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 VSX2P58304 361 aaPredicted RBP2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 SEMG2Q02383 582 aa2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 MERTKQ12866 999 aa2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 AVPI1Q5T686 147 aa2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 C12orf54Q6X4T0 127 aa2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 SHISA6Q6ZSJ9 500 aa2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 CDKL3Q8IVW4 592 aaPredicted RBP2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 COX18Q8N8Q8 333 aa2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 CHST4Q8NCG5 386 aa2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 OR9G4Q8NGQ1 327 aa2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 CIRBP-AS1Q8TBR5 109 aa2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 APH1BQ8WW43 257 aa2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 PTX4Q96A99 478 aa2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 C8orf44Q96CB5 159 aa2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 FLYWCH2Q96CP2 140 aaKnown RBP2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 ZNF488Q96MN9 340 aa2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 ZNF317Q96PQ6 595 aaPredicted RBP2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 DDX19AQ9NUU7 478 aaKnown RBP2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 LYARQ9NX58 379 aaKnown RBP2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 KIF26AQ9ULI4 1882 aaPredicted RBP2.85□□□□□ -1.95
HMGCS1-207ENST00000514610 PLA2R1Q13018 1463 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 COL22A1Q8NFW1 1626 aaPredicted RBP2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 IGHV1OR15-9A0A0B4J2B8 117 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 A0A1W2PQ67 120 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 OR6C74A6NCV1 312 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 H7C1H1 209 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 DNASE2O00115 360 aaPredicted RBP2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 BPY2O14599 106 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 SLC9A3R1O14745 358 aaPredicted RBP2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 ERCC1P07992 297 aaPredicted RBP2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 CSNK2A2P19784 350 aaPredicted RBP2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 EIF2S2P20042 333 aaKnown RBP2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 UQCRFS1P47985 274 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 SLC11A1P49279 550 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 CDKN2DP55273 166 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 ZNF880Q6PDB4 577 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 TTC23LQ6PF05 361 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 MBOAT2Q6ZWT7 520 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 BZW1Q7L1Q6 419 aaKnown RBP2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 LUZP2Q86TE4 346 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 WDFY1Q8IWB7 410 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 OFCC1Q8IZS5 231 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 PQLC3Q8N755 202 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 DEDD2Q8WXF8 326 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 RGP1Q92546 391 aaPredicted RBP2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 OR10C1Q96KK4 312 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 XPO6Q96QU8 1125 aaKnown RBP2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 SLC7A5P2Q9GIP4 190 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 TMEM38AQ9H6F2 299 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 SLC38A10Q9HBR0 1119 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 ACP6Q9NPH0 428 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 GGA2Q9UJY4 613 aa2.84□□□□□ -1.95
HMGCS1-207ENST00000514610 PTPRTO14522 1441 aa2.84□□□□□ -1.96
HMGCS1-207ENST00000514610 DOCK8Q8NF50 2099 aa2.83□□□□□ -1.96
HMGCS1-207ENST00000514610 REM1O75628 298 aa2.83□□□□□ -1.96
HMGCS1-207ENST00000514610 OR8U9P0C7N5 309 aa2.83□□□□□ -1.96
HMGCS1-207ENST00000514610 ZNF806P0C7X5 589 aa2.83□□□□□ -1.96
HMGCS1-207ENST00000514610 CTRB1P17538 263 aa2.83□□□□□ -1.96
HMGCS1-207ENST00000514610 CDC20Q12834 499 aa2.83□□□□□ -1.96
HMGCS1-207ENST00000514610 ZNF266Q14584 549 aa2.83□□□□□ -1.96
HMGCS1-207ENST00000514610 COX19Q49B96 90 aa2.83□□□□□ -1.96
HMGCS1-207ENST00000514610 SLC16A13Q7RTY0 426 aa2.83□□□□□ -1.96
HMGCS1-207ENST00000514610 MRPL55Q7Z7F7 128 aaKnown RBP2.83□□□□□ -1.96
HMGCS1-207ENST00000514610 FAM71AQ8IYT1 594 aa2.83□□□□□ -1.96
HMGCS1-207ENST00000514610 GABRG1Q8N1C3 465 aa2.83□□□□□ -1.96
HMGCS1-207ENST00000514610 TTC29Q8NA56 475 aaPredicted RBP2.83□□□□□ -1.96
HMGCS1-207ENST00000514610 OR51E1Q8TCB6 317 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms