RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 HIF3AQ9Y2N7 669 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 PRAMEF25A6NGN4 478 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 PTGFRP43088 359 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 ZNF705AQ6ZN79 300 aaPredicted RBP11.94□□□□□ -0.5
TCOF1-213ENST00000514442 MISPQ8IVT2 679 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 RAB39BQ96DA2 213 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 NEU3Q9UQ49 428 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 EIF3GO75821 320 aaKnown RBP eCLIP11.94□□□□□ -0.5
TCOF1-213ENST00000514442 DIRAS3O95661 229 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 ABOP16442 354 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 TRAPPC6BQ86SZ2 158 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 OR4C16Q8NGL9 310 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 C16orf52Q8NHV5 167 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 GLYATL2Q8WU03 294 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 TAAR8Q969N4 342 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 C19orf43Q9BQ61 176 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 EDEM2Q9BV94 578 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 PLEKHJ1Q9NW61 149 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 WSB2Q9NYS7 404 aaPredicted RBP11.94□□□□□ -0.5
TCOF1-213ENST00000514442 ANKRD61A6NGH8 418 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 METTL12A8MUP2 240 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 ADAM11O75078 769 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 DBHP09172 617 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 SERPINA2P20848 420 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 CLINT1Q14677 625 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 YOD1Q5VVQ6 348 aaPredicted RBP11.94□□□□□ -0.5
TCOF1-213ENST00000514442 DPY19L2P2Q6ZN68 376 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 SYT13Q7L8C5 426 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 PDCD1LG2Q9BQ51 273 aa11.94□□□□□ -0.5
TCOF1-213ENST00000514442 PCYT1BQ9Y5K3 369 aaPredicted RBP11.94□□□□□ -0.5
TCOF1-213ENST00000514442 NRG2O14511 850 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-213ENST00000514442 TCAPO15273 167 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 DDAH2O95865 285 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 FGF2P09038 288 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 OR13C7P0DN81 318 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 ATF1P18846 271 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 PSMB6P28072 239 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 DRD3P35462 400 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 COL13A1Q5TAT6 717 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-213ENST00000514442 ZNF620Q6ZNG0 422 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 AAED1Q7RTV5 226 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 SLC16A14Q7RTX9 510 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 GABRG1Q8N1C3 465 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 UBAC2Q8NBM4 344 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 PPP1R1CQ8WVI7 109 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 DCBLD2Q96PD2 775 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 SEC11CQ9BY50 192 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 B3GALT1Q9Y5Z6 326 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 AKR7A3O95154 331 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 IFNA5P01569 189 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 ABCD3P28288 659 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 RNF4P78317 190 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 C1orf140Q5VVS0 124 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 MRPS24Q96EL2 167 aaKnown RBP11.93□□□□□ -0.5
TCOF1-213ENST00000514442 ZNF845Q96IR2 970 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-213ENST00000514442 PLA2G12AQ9BZM1 189 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 TAAR5O14804 337 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 CD14P08571 375 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 HOXB5P09067 269 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 HTR5AP47898 357 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 PLCXD3Q63HM9 321 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 LCN10Q6JVE6 187 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 OR10D4PQ8NGN7 298 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 MAFAQ8NHW3 353 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-213ENST00000514442 PIGCQ92535 297 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 AKR1E2Q96JD6 320 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 UBE2J1Q9Y385 318 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-213ENST00000514442 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-213ENST00000514442 CTDSPLO15194 276 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 DFFBO76075 338 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 WISP3O95389 354 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-213ENST00000514442 CLDN6P56747 220 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 TIAL1Q01085 375 aaKnown RBP eCLIP11.93□□□□□ -0.5
TCOF1-213ENST00000514442 COTL1Q14019 142 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 COX15Q7KZN9 410 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 OR51D1Q8NGF3 324 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 SCGB1C1Q8TD33 95 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 ASB17Q8WXJ9 295 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 HSD17B8Q92506 261 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 MALSU1Q96EH3 234 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 CALHM2Q9HA72 323 aa11.93□□□□□ -0.5
TCOF1-213ENST00000514442 A8MVM7 634 aa11.92□□□□□ -0.5
TCOF1-213ENST00000514442 IGHEP01854 428 aa11.92□□□□□ -0.5
TCOF1-213ENST00000514442 HOXB3P14651 431 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-213ENST00000514442 PABPC1L2AQ5JQF8 200 aa11.92□□□□□ -0.5
TCOF1-213ENST00000514442 RHOUQ7L0Q8 258 aa11.92□□□□□ -0.5
TCOF1-213ENST00000514442 MUC20Q8N307 709 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-213ENST00000514442 AMER3Q8N944 861 aa11.92□□□□□ -0.5
TCOF1-213ENST00000514442 OR13C9Q8NGT0 318 aa11.92□□□□□ -0.5
TCOF1-213ENST00000514442 RRNAD1Q96FB5 475 aaKnown RBP11.92□□□□□ -0.5
TCOF1-213ENST00000514442 RSRP1Q9BUV0 290 aa11.92□□□□□ -0.5
TCOF1-213ENST00000514442 GHRLQ9UBU3 117 aa11.92□□□□□ -0.5
TCOF1-213ENST00000514442 CXorf51AA0A1B0GTR3 108 aa11.92□□□□□ -0.5
TCOF1-213ENST00000514442 ICOSLGO75144 302 aa11.92□□□□□ -0.5
TCOF1-213ENST00000514442 LAP3P28838 519 aa11.92□□□□□ -0.5
TCOF1-213ENST00000514442 CCL11P51671 97 aa11.92□□□□□ -0.5
TCOF1-213ENST00000514442 F2RL1P55085 397 aa11.92□□□□□ -0.5
TCOF1-213ENST00000514442 Q6ZRG5 221 aa11.92□□□□□ -0.5
TCOF1-213ENST00000514442 SGPP2Q8IWX5 399 aa11.92□□□□□ -0.5
TCOF1-213ENST00000514442 SLC39A7Q92504 469 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms