RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 ZNF101Q8IZC7 436 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 GJC3Q8NFK1 279 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 OR1F12Q8NHA8 337 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 ST7LQ8TDW4 575 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 SLAMF6Q96DU3 332 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 LURAP1Q96LR2 239 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 TEAD3Q99594 435 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 ATF6BQ99941 703 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 RHNO1Q9BSD3 238 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 ABHD6Q9BV23 337 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 MARCH7Q9H992 704 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 AMBNQ9NP70 447 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 C8orf4Q9NR00 106 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 CA10Q9NS85 328 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 CISD1Q9NZ45 108 aaKnown RBP8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 H2AFY2Q9P0M6 372 aaPredicted RBP8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 FBXL3Q9UKT7 428 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 PLEKHA6Q9Y2H5 1048 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 ITPR2Q14571 2701 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 AKAP6Q13023 2319 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 CSMD1Q96PZ7 3565 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 C5orf63A6NC05 138 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 A6NHS1 94 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 F5H5K5 113 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 WBP4O75554 376 aaKnown RBP8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 GOSR1O95249 250 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 ABHD16AO95870 558 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 NGFP01138 241 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 LCKP06239 509 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 SOD3P08294 240 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 SLC2A1P11166 492 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 FABP6P51161 128 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 PRKXP51817 358 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 BLVRAP53004 296 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 SNRPGP62308 76 aaKnown RBP8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 NKX6-1P78426 367 aaPredicted RBP8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 GGTLC2Q14390 218 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 PCK2Q16822 640 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 PAMR1Q6UXH9 720 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 LRRN1Q6UXK5 716 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 PLEKHG7Q6ZR37 379 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 SSX6Q7RTT6 188 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 SLC16A9Q7RTY1 509 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 NAA40Q86UY6 237 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 LRP11Q86VZ4 500 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 SLC35F2Q8IXU6 374 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 ALDH16A1Q8IZ83 802 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 OTOSQ8NHW6 89 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 ABHD4Q8TB40 342 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 THEM6Q8WUY1 208 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 FBXW5Q969U6 566 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 RNFT2Q96EX2 444 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 COQ7Q99807 217 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 APOL4Q9BPW4 351 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 COPS4Q9BT78 406 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 HDHD2Q9H0R4 259 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 C1orf198Q9H425 327 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 MOV10Q9HCE1 1003 aaKnown RBP8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 GRIP1Q9Y3R0 1128 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 N6AMT1Q9Y5N5 214 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 PLCE1Q9P212 2302 aa8.45□□□□□ -1.06
TOPBP1-209ENST00000513818 PDZD2O15018 2839 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 ZNF878C9JN71 531 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 TMCC2O75069 709 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 PTHP01270 115 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 LYNP07948 512 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 SBK2P0C263 348 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 DBTP11182 482 aaKnown RBP8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 VHLP40337 213 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 SLC6A9P48067 706 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 TAF13Q15543 124 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 ADIPOQQ15848 244 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 RSPO1Q2MKA7 263 aaPredicted RBP8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 ALKBH6Q3KRA9 238 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 TMEM255AQ5JRV8 349 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 TEX30Q5JUR7 227 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 C1QTNF12Q5T7M4 302 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 TTC23Q5W5X9 447 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 OR10H4Q8NGA5 316 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 OR1J2Q8NGS2 313 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 OR1J1Q8NGS3 322 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 RHOXF1Q8NHV9 184 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 TMEM171Q8WVE6 324 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 TRUB1Q8WWH5 349 aaKnown RBP8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 C4orf45Q96LM5 186 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 DHRS9Q9BPW9 319 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 SYT3Q9BQG1 590 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 BRD7Q9NPI1 651 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 DDX28Q9NUL7 540 aaKnown RBP8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 CLN6Q9NWW5 311 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 PTTG3PQ9NZH4 202 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 MYEF2Q9P2K5 600 aaKnown RBP8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 WARS2Q9UGM6 360 aaKnown RBP8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 LAMP5Q9UJQ1 280 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 LAMP3Q9UQV4 416 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 RTTNQ86VV8 2226 aa8.44□□□□□ -1.06
TOPBP1-209ENST00000513818 M0R135 149 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 CLPTM1O96005 669 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 ADRA2AP08913 450 aa8.43□□□□□ -1.06
TOPBP1-209ENST00000513818 OR4A8P0C604 315 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms