RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ASXL3Q9C0F0 2248 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 RP1P56715 2156 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 AKAP13Q12802 2813 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 KCNE1BA0A087WTH5 132 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 IGHV1-45A0A0A0MS14 117 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 FBLL1A6NHQ2 334 aaKnown RBP3.24□□□□□ -1.89
HTT-210ENST00000512909 FAM159BA6NKW6 160 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 VSTM2BA6NLU5 285 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 SYCE1LA8MT33 242 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 TCP11X1B4DZS4 312 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 TRIM49D1C9J1S8 452 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 E7ESA3 106 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.24□□□□□ -1.89
HTT-210ENST00000512909 GOLGA8RI6L899 631 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 KIF2AO00139 706 aaPredicted RBP3.24□□□□□ -1.89
HTT-210ENST00000512909 TAPBPO15533 448 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 NSA2O95478 260 aaKnown RBP3.24□□□□□ -1.89
HTT-210ENST00000512909 AK1P00568 194 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 SERPINA7P05543 415 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 C2P06681 752 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 RBP1P09455 135 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 WNT2P09544 360 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 ZCCHC18P0CG32 403 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 SLC35E2P0CK97 266 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 ERGP11308 486 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 ANXA3P12429 323 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 TAC1P20366 129 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 CPN2P22792 545 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 HPDP32754 393 aaPredicted RBP3.24□□□□□ -1.89
HTT-210ENST00000512909 DEKP35659 375 aaKnown RBP3.24□□□□□ -1.89
HTT-210ENST00000512909 PTGFRP43088 359 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 UQCRFS1P47985 274 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 SERPINB8P50452 374 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 CCNG1P51959 295 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 DSCR10P59022 87 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 BPIFB3P59826 476 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 PLGLB1Q02325 96 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 RELAQ04206 551 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 SLAMF1Q13291 335 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 TGFBIQ15582 683 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 OR4D1Q15615 310 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 ZNF239Q16600 458 aaKnown RBP3.24□□□□□ -1.89
HTT-210ENST00000512909 PDK4Q16654 411 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 CYP51A1Q16850 503 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 ZSWIM7Q19AV6 140 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 ADPRMQ3LIE5 342 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 RSBN1Q5VWQ0 802 aaPredicted RBP3.24□□□□□ -1.89
HTT-210ENST00000512909 SPINK14Q6IE38 97 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 NIPAL1Q6NVV3 410 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 MED27Q6P2C8 311 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 SBSNQ6UWP8 590 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 VN1R4Q7Z5H5 301 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 RPS19BP1Q86WX3 136 aaKnown RBP3.24□□□□□ -1.89
HTT-210ENST00000512909 MMGT1Q8N4V1 131 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 TMEM156Q8N614 296 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 MINDY2Q8NBR6 621 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 TTLQ8NG68 377 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 TYMSOSQ8TAI1 123 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 TRUB1Q8WWH5 349 aaKnown RBP3.24□□□□□ -1.89
HTT-210ENST00000512909 ANKRD7Q92527 254 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 TSLPQ969D9 159 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 UBE2E3Q969T4 207 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 PPWD1Q96BP3 646 aaKnown RBP3.24□□□□□ -1.89
HTT-210ENST00000512909 SLC25A36Q96CQ1 311 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 NTNG2Q96CW9 530 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 TM4SF19Q96DZ7 209 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 OR4K3Q96R72 315 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 FMO2Q99518 471 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 GPR22Q99680 433 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 UTP23Q9BRU9 249 aaKnown RBP3.24□□□□□ -1.89
HTT-210ENST00000512909 CENPKQ9BS16 269 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 TPPP3Q9BW30 176 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 HCAR1Q9BXC0 346 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 COMMD4Q9H0A8 199 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 SPNS1Q9H2V7 528 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 OR51B5Q9H339 312 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 WDR76Q9H967 626 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 POPDC3Q9HBV1 291 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 NANSQ9NR45 359 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 MBD2Q9UBB5 411 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 TBK1Q9UHD2 729 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 FOXJ3Q9UPW0 622 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 MRPS33Q9Y291 106 aaKnown RBP3.24□□□□□ -1.89
HTT-210ENST00000512909 SLC22A7Q9Y694 548 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 LRP4O75096 1905 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 UNC13CQ8NB66 2214 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 CACNA1AO00555 2505 aa3.24□□□□□ -1.89
HTT-210ENST00000512909 MYO15AQ9UKN7 3530 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 TRAV17A0A0B4J275 112 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 TRBV11-1A0A0K0K1C0 115 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 EXOC1LA0A1B0GW35 172 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 LRRC30A6NM36 301 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 GABRR3A8MPY1 467 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 E9PLD3 99 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 K7EPI3 171 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 WWP2O00308 870 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 CCL21O00585 134 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 TNFSF11O14788 317 aa3.23□□□□□ -1.89
HTT-210ENST00000512909 CDC40O60508 579 aaKnown RBP eCLIP3.23□□□□□ -1.89
HTT-210ENST00000512909 TRIM3O75382 744 aaPredicted RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms