RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 DFFBO76075 338 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 SPDEFO95238 335 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 EML2O95834 649 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 NUDT3O95989 172 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 ARG1P05089 322 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 OR5AC1P0C628 307 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 ELF3P78545 371 aaPredicted RBP8.14□□□□□ -1.11
VCAN-208ENST00000512590 TBCEQ15813 527 aaPredicted RBP8.14□□□□□ -1.11
VCAN-208ENST00000512590 ACOT6Q3I5F7 207 aaPredicted RBP8.14□□□□□ -1.11
VCAN-208ENST00000512590 SCGB1D4Q6XE38 83 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 OR13J1Q8NGT2 312 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 STARD4Q96DR4 205 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 APIPQ96GX9 242 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 OR2J1Q9GZK6 312 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 ST6GALNAC4Q9H4F1 302 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 WDR76Q9H967 626 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 SAP30LQ9HAJ7 183 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 BCORL1Q5H9F3 1711 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 C10orf71Q711Q0 1435 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 FAM183AA6NL82 134 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 SSPNQ14714 243 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 ABHD17CQ6PCB6 329 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 RPS27LQ71UM5 84 aaKnown RBP8.14□□□□□ -1.11
VCAN-208ENST00000512590 SLC35F3Q8IY50 421 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 CLECL1Q8IZS7 167 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 LYG1Q8N1E2 194 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 SYT8Q8NBV8 401 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 OR10V1Q8NGI7 309 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 PAQR8Q8TEZ7 354 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 IMP4Q96G21 291 aaKnown RBP8.14□□□□□ -1.11
VCAN-208ENST00000512590 BORCS6Q96GS4 357 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 SLC22A12Q96S37 553 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 IKZF4Q9H2S9 585 aa8.14□□□□□ -1.11
VCAN-208ENST00000512590 MARCH4Q9P2E8 410 aaPredicted RBP8.14□□□□□ -1.11
VCAN-208ENST00000512590 GNG7O60262 68 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 ITGAMP11215 1152 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 TAS1R1Q7RTX1 841 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 MORN4Q8NDC4 146 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 OR10P1Q8NGE3 313 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 PERPQ96FX8 193 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 ADGRG7Q96K78 797 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 CSF3RQ99062 836 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 NEURL2Q9BR09 285 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 ABCG5Q9H222 651 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 SLC7A10Q9NS82 523 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 POM121CA8CG34 1229 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 ZNF324O75467 553 aaPredicted RBP8.13□□□□□ -1.11
VCAN-208ENST00000512590 IL9P15248 144 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 NTF3P20783 257 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 DLX1P56177 255 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 IL11RAQ14626 422 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 SLC5A12Q1EHB4 618 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 ZNF343Q6P1L6 599 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 GLCCI1Q86VQ1 547 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 SLC22A24Q8N4F4 322 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 SIMC1Q8NDZ2 872 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 GPR87Q9BY21 358 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 ZDHHC2Q9UIJ5 367 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 A0A087WZY1 265 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 NPIPB6E9PJ23 425 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 PRSS2P07478 247 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 BSGP35613 385 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 HLCSP50747 726 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 HOXC5Q00444 222 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 ZNF705AQ6ZN79 300 aaPredicted RBP8.13□□□□□ -1.11
VCAN-208ENST00000512590 UMODL1-AS1Q8N2C9 162 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 OR8J3Q8NGG0 315 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 MGLLQ99685 303 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 QRSL1Q9H0R6 528 aaKnown RBP8.13□□□□□ -1.11
VCAN-208ENST00000512590 PIGMQ9H3S5 423 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 SF3B6Q9Y3B4 125 aaKnown RBP8.13□□□□□ -1.11
VCAN-208ENST00000512590 ABCA9Q8IUA7 1624 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 FBXO24O75426 580 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 HSD17B1P14061 328 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 MFAP4P55083 255 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 LY6EQ16553 131 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 CCDC144NLQ6NUI1 221 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 EIF4E3Q8N5X7 224 aaKnown RBP8.13□□□□□ -1.11
VCAN-208ENST00000512590 DYNC2LI1Q8TCX1 351 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 POM121Q96HA1 1249 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 CLN8Q9UBY8 286 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 MOKQ9UQ07 419 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 ERCC6L2Q5T890 1561 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 M0R1X1 148 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 EIF3FO00303 357 aaPredicted RBP8.13□□□□□ -1.11
VCAN-208ENST00000512590 PHOX2AO14813 284 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 LINC01565O15544 149 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 SNAPINO95295 136 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 LHBP01229 141 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 SLC25A5P05141 298 aaKnown RBP8.13□□□□□ -1.11
VCAN-208ENST00000512590 IMPA1P29218 277 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 MRPL2Q5T653 305 aaKnown RBP8.13□□□□□ -1.11
VCAN-208ENST00000512590 COMMD1Q8N668 190 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 OR13G1Q8NGZ3 307 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 C4orf36Q96KX1 117 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 NPY6RQ99463 290 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 GABRG3Q99928 467 aa8.13□□□□□ -1.11
VCAN-208ENST00000512590 FAM103A1Q9BTL3 118 aaKnown RBP8.13□□□□□ -1.11
VCAN-208ENST00000512590 NME2P1O60361 137 aa8.12□□□□□ -1.11
VCAN-208ENST00000512590 EIF4E2O60573 245 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms