RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 RBM48Q5RL73 367 aaKnown RBP5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 GAGE2AQ6NT46 116 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 SLC25A48Q6ZT89 311 aaKnown RBP5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 TMED4Q7Z7H5 227 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 ZNF843Q8N446 348 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 ARRDC1Q8N5I2 433 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 OR10G3Q8NGC4 313 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 OR5L1Q8NGL2 311 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 OR10C1Q96KK4 312 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 MED18Q9BUE0 208 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 SLC38A7Q9NVC3 462 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 GAGE2DQ9UEU5 116 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 DKKL1Q9UK85 242 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 GOLT1BQ9Y3E0 138 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 NME7Q9Y5B8 376 aa5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 COL2A1P02458 1487 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC11-209ENST00000512476 WDR81Q562E7 1941 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 SMIM28A0A1B0GU29 152 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 F5H6K3 240 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 EPHB6O15197 1021 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 OAS1P00973 400 aaKnown RBP5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 IGHG3P01860 377 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 HIST1H1EP10412 219 aaKnown RBP5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 HOXD3P31249 432 aaPredicted RBP5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 PAX9P55771 341 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 TCP10Q12799 353 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 ABRAXAS2Q15018 415 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 C3AR1Q16581 482 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 HAGHQ16775 308 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 PRR31Q5SQ13 230 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 SFTPA2Q8IWL1 248 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 ATPAF2Q8N5M1 289 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 HSD17B11Q8NBQ5 300 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 OR6K2Q8NGY2 324 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 OR2T11Q8NH01 316 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 TMEM18Q96B42 140 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 ITCHQ96J02 903 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 KCTD7Q96MP8 289 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 PHB2Q99623 299 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 C7orf69Q9H7B7 122 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 NRN1Q9NPD7 142 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 TMEM138Q9NPI0 162 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 HRASLS2Q9NWW9 162 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 THAP10Q9P2Z0 257 aaPredicted RBP5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 IGKV6D-41A0A0C4DH26 115 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 METTL15A6NJ78 407 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 M0QZK8 103 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 ZIC3O60481 467 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 CST8O60676 142 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 ANXA9O76027 345 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 CLIC3O95833 236 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 CD1EP15812 388 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 GATA1P15976 413 aaPredicted RBP5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 GDF1P27539 372 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 TAS2R31P59538 309 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 CX3CL1P78423 397 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 MFGE8Q08431 387 aaPredicted RBP5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 EFEMP1Q12805 493 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 GTF2H2Q13888 395 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 RBM39Q14498 530 aaKnown RBP5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 MEF2DQ14814 521 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 SPIN4Q56A73 249 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 SLC35D3Q5M8T2 416 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 GTF2H2CQ6P1K8 395 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 EPGNQ6UW88 154 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 TMEM179Q6ZVK1 233 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 CCDC71Q8IV32 467 aaPredicted RBP5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 EIF4E3Q8N5X7 224 aaKnown RBP5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 KIR3DL3Q8N743 410 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 ARIH2OSQ8N7S6 290 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 OR51D1Q8NGF3 324 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 YIPF5Q969M3 257 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 MRPS26Q9BYN8 205 aaKnown RBP5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 SDCBP2Q9H190 292 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 SDHAF2Q9NX18 166 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 SLC12A6Q9UHW9 1150 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 KCNS2Q9ULS6 477 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 RAB26Q9ULW5 256 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 MOKQ9UQ07 419 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 UFC1Q9Y3C8 167 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 HS3ST3B1Q9Y662 390 aa5.41□□□□□ -1.54
TRAPPC11-209ENST00000512476 A0A0B4J2E0 115 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 A0A1B0GX12 115 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 H3BMQ9 156 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 HPNP05981 417 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 BCHEP06276 602 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 PRSS56P0CW18 603 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 SLURP2P0DP57 97 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 ZNF17P17021 662 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 GAS1P54826 345 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 EIF4EBP2Q13542 120 aaPredicted RBP5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 UPP1Q16831 310 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 CBLL1Q75N03 491 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 HSD11B1LQ7Z5J1 315 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 LGI4Q8N135 537 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 OR5AK3PQ8NH89 298 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 OR5K2Q8NHB8 316 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 GRPEL2Q8TAA5 225 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 SORCS2Q96PQ0 1159 aa5.4□□□□□ -1.54
TRAPPC11-209ENST00000512476 CDCA3Q99618 268 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms