RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 MEPEQ9NQ76 525 aaPredicted RBP5.25□□□□□ -1.57
CHD1-208ENST00000512392 WRAP73Q9P2S5 460 aaPredicted RBP5.25□□□□□ -1.57
CHD1-208ENST00000512392 MGAT4AQ9UM21 535 aa5.25□□□□□ -1.57
CHD1-208ENST00000512392 ARID2Q68CP9 1835 aa5.25□□□□□ -1.57
CHD1-208ENST00000512392 USP27XA6NNY8 438 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 ANKRD63C9JTQ0 380 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 ATP6V1G2-DDX39BF2Z307 99 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 NME4O00746 187 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 VENTXO95231 258 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 PCCAP05165 728 aaPredicted RBP5.24□□□□□ -1.57
CHD1-208ENST00000512392 CST2P09228 141 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 SNHG28P0DPA3 235 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 PVRP15151 417 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 ZNF250P15622 560 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 RAB8AP61006 207 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 BLOC1S1P78537 153 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 ZNF85Q03923 595 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 CD226Q15762 336 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 METTL13Q8N6R0 699 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 CLDN22Q8N7P3 220 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 OR13D1Q8NGV5 346 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 STMN2Q93045 179 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 DNAJC19Q96DA6 116 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 OR8B4Q96RC9 309 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 DDX19AQ9NUU7 478 aaKnown RBP5.24□□□□□ -1.57
CHD1-208ENST00000512392 C11orf21Q9P2W6 132 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 NUP153P49790 1475 aaKnown RBP5.24□□□□□ -1.57
CHD1-208ENST00000512392 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.24□□□□□ -1.57
CHD1-208ENST00000512392 A0A1B0GV90 55 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.24□□□□□ -1.57
CHD1-208ENST00000512392 TMX2-CTNND1H3BSU7 103 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 K7EMT4 169 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 EEDO75530 441 aaKnown RBP5.24□□□□□ -1.57
CHD1-208ENST00000512392 EIF3GO75821 320 aaKnown RBP eCLIP5.24□□□□□ -1.57
CHD1-208ENST00000512392 APOC1P02654 83 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 FGF2P09038 288 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 RAB7AP51149 207 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 UBE2E1P51965 193 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 AP1S2P56377 157 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 SP4Q02446 784 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 GNMTQ14749 295 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 FAM27D1Q5T7N8 215 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 CST9Q5W186 159 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 FAM57BQ71RH2 274 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 OR4N5Q8IXE1 308 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 CPNE9Q8IYJ1 553 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 FBXL14Q8N1E6 418 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 CA13Q8N1Q1 262 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 LRRC18Q8N456 261 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 ACOT4Q8N9L9 421 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 TMEM161BQ8NDZ6 487 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 SDR42E1Q8WUS8 393 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 MYEOVQ96EZ4 313 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 CPNE2Q96FN4 548 aaPredicted RBP5.24□□□□□ -1.57
CHD1-208ENST00000512392 UBE2E2Q96LR5 201 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 BBC3Q96PG8 261 aaPredicted RBP5.24□□□□□ -1.57
CHD1-208ENST00000512392 MAP1LC3AQ9H492 121 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 ZBTB20Q9HC78 741 aaPredicted RBP5.24□□□□□ -1.57
CHD1-208ENST00000512392 TMEM45AQ9NWC5 275 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 TREM2Q9NZC2 230 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 GSKIPQ9P0R6 139 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 HHLA2Q9UM44 414 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 KLF12Q9Y4X4 402 aa5.24□□□□□ -1.57
CHD1-208ENST00000512392 CCDC144AA2RUR9 1427 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 FRMPD3Q5JV73 1810 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 NRCAMQ92823 1304 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 DHRS7CA6NNS2 312 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 M0QZK8 103 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 ZNHIT1O43257 154 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 SMIM24O75264 130 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 BCAR3O75815 825 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 SOX30O94993 753 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 KLF8O95600 359 aaPredicted RBP5.23□□□□□ -1.57
CHD1-208ENST00000512392 CD8AP01732 235 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 MT-ND4P03905 459 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 GTF2F2P13984 249 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 GZMHP20718 246 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 CCKARP32238 428 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 IFNGR2P38484 337 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 YAP1P46937 504 aaKnown RBP5.23□□□□□ -1.57
CHD1-208ENST00000512392 STXBP1P61764 594 aaKnown RBP5.23□□□□□ -1.57
CHD1-208ENST00000512392 ZNF234Q14588 700 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 OR8G2PQ6IF36 304 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 TYW3Q6IPR3 259 aaKnown RBP5.23□□□□□ -1.57
CHD1-208ENST00000512392 CBLN2Q8IUK8 224 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 PRR22Q8IZ63 422 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 KBTBD8Q8NFY9 601 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 FAM45AQ8TCE6 357 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 EEF1AKMT3Q96AZ1 226 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 SFRP2Q96HF1 295 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 HBEGFQ99075 208 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 PECRQ9BY49 303 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 Q9HAA7 133 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 AURKAIP1Q9NWT8 199 aaPredicted RBP5.23□□□□□ -1.57
CHD1-208ENST00000512392 GALPQ9UBC7 116 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 MLXQ9UH92 298 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 FBXO5Q9UKT4 447 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 FAM32AQ9Y421 112 aaKnown RBP5.23□□□□□ -1.57
CHD1-208ENST00000512392 NID2Q14112 1375 aa5.23□□□□□ -1.57
CHD1-208ENST00000512392 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms