RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 ARL9Q6T311 187 aa14.03□□□□□ -0.16
DDX41-213ENST00000512027 USP51Q70EK9 711 aa14.03□□□□□ -0.16
DDX41-213ENST00000512027 HIPK1Q86Z02 1210 aa14.03□□□□□ -0.16
DDX41-213ENST00000512027 AQP12AQ8IXF9 295 aa14.03□□□□□ -0.16
DDX41-213ENST00000512027 IQCF1Q8N6M8 205 aa14.03□□□□□ -0.16
DDX41-213ENST00000512027 DGCR6LQ9BY27 220 aa14.03□□□□□ -0.16
DDX41-213ENST00000512027 CADM1Q9BY67 442 aaKnown RBP14.03□□□□□ -0.16
DDX41-213ENST00000512027 PTTG3PQ9NZH4 202 aa14.03□□□□□ -0.16
DDX41-213ENST00000512027 MXRA5Q9NR99 2828 aa14.02□□□□□ -0.16
DDX41-213ENST00000512027 PLSCR5A0PG75 271 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 TIMM8AO60220 97 aaPredicted RBP14.02□□□□□ -0.17
DDX41-213ENST00000512027 LMX1BO60663 402 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 DNAJC8O75937 253 aaPredicted RBP14.02□□□□□ -0.17
DDX41-213ENST00000512027 TGFAP01135 160 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 CLUP10909 449 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 GGT2P36268 569 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 PRSS12P56730 875 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 HLXQ14774 488 aaPredicted RBP14.02□□□□□ -0.17
DDX41-213ENST00000512027 RSPO1Q2MKA7 263 aaPredicted RBP14.02□□□□□ -0.17
DDX41-213ENST00000512027 PCGF3Q3KNV8 242 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 SLC36A3Q495N2 470 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 UNQ6126/PRO20091Q6UXV3 157 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 LNX2Q8N448 690 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 PROKR2Q8NFJ6 384 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 GJC3Q8NFK1 279 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 CLDND2Q8NHS1 167 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 GIPC3Q8TF64 312 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 CMBLQ96DG6 245 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 FEVQ99581 238 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 SAP30LQ9HAJ7 183 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 DECR2Q9NUI1 292 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 TBCCD1Q9NVR7 557 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 NKIRAS2Q9NYR9 191 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 POMPQ9Y244 141 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 FBN1P35555 2871 aaKnown RBP14.02□□□□□ -0.17
DDX41-213ENST00000512027 ATRQ13535 2644 aa14.02□□□□□ -0.17
DDX41-213ENST00000512027 IGHV1-69-2A0A0G2JMI3 117 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 GNGT2O14610 69 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 MT-ND5P03915 603 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 GSTM3P21266 225 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 MVKQ03426 396 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 MOGQ16653 247 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 CHRFAM7AQ494W8 412 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 FAM166AQ6J272 317 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 Q6ZR03 302 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 OR5AS1Q8N127 324 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 OR10S1Q8NGN2 331 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 SLCO4A1Q96BD0 722 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 MAP6Q96JE9 813 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 PITX2Q99697 317 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 COQ7Q99807 217 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 HDHD2Q9H0R4 259 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 MED20Q9H944 212 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 WDR76Q9H967 626 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 PNRC2Q9NPJ4 139 aaKnown RBP14.01□□□□□ -0.17
DDX41-213ENST00000512027 DCAF16Q9NXF7 216 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 CYB5R1Q9UHQ9 305 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 KLHL21Q9UJP4 597 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 PURGQ9UJV8 347 aaKnown RBP14.01□□□□□ -0.17
DDX41-213ENST00000512027 KCNS2Q9ULS6 477 aa14.01□□□□□ -0.17
DDX41-213ENST00000512027 DNHD1Q96M86 4753 aa14□□□□□ -0.17
DDX41-213ENST00000512027 TCRBV3S1A0A5B6 114 aa14□□□□□ -0.17
DDX41-213ENST00000512027 H3BSA7 217 aa14□□□□□ -0.17
DDX41-213ENST00000512027 GSC2O15499 205 aa14□□□□□ -0.17
DDX41-213ENST00000512027 FKBP6O75344 327 aa14□□□□□ -0.17
DDX41-213ENST00000512027 PRKACGP22612 351 aa14□□□□□ -0.17
DDX41-213ENST00000512027 ANOS1P23352 680 aa14□□□□□ -0.17
DDX41-213ENST00000512027 CRYBB2P43320 205 aa14□□□□□ -0.17
DDX41-213ENST00000512027 MRPS11P82912 194 aaKnown RBP14□□□□□ -0.17
DDX41-213ENST00000512027 CBX1P83916 185 aa14□□□□□ -0.17
DDX41-213ENST00000512027 BNIP1Q12981 228 aa14□□□□□ -0.17
DDX41-213ENST00000512027 ZNF771Q7L3S4 317 aaPredicted RBP14□□□□□ -0.17
DDX41-213ENST00000512027 NAA40Q86UY6 237 aa14□□□□□ -0.17
DDX41-213ENST00000512027 C1orf174Q8IYL3 243 aa14□□□□□ -0.17
DDX41-213ENST00000512027 ZNF511Q8NB15 262 aa14□□□□□ -0.17
DDX41-213ENST00000512027 OR2T33Q8NG76 320 aa14□□□□□ -0.17
DDX41-213ENST00000512027 OR2AJ1Q8NGZ0 328 aa14□□□□□ -0.17
DDX41-213ENST00000512027 RBM4Q9BWF3 364 aaKnown RBP14□□□□□ -0.17
DDX41-213ENST00000512027 CDADC1Q9BWV3 514 aa14□□□□□ -0.17
DDX41-213ENST00000512027 HCAR1Q9BXC0 346 aa14□□□□□ -0.17
DDX41-213ENST00000512027 LPAR2Q9HBW0 351 aa14□□□□□ -0.17
DDX41-213ENST00000512027 PDP1Q9P0J1 537 aaPredicted RBP14□□□□□ -0.17
DDX41-213ENST00000512027 ATPIF1Q9UII2 106 aa14□□□□□ -0.17
DDX41-213ENST00000512027 DYSFO75923 2080 aa14□□□□□ -0.17
DDX41-213ENST00000512027 FAM183AA6NL82 134 aa13.99□□□□□ -0.17
DDX41-213ENST00000512027 FAM157AC9JC47 383 aa13.99□□□□□ -0.17
DDX41-213ENST00000512027 F5H5K5 113 aa13.99□□□□□ -0.17
DDX41-213ENST00000512027 H3BN98 237 aa13.99□□□□□ -0.17
DDX41-213ENST00000512027 SPI1P17947 270 aa13.99□□□□□ -0.17
DDX41-213ENST00000512027 CDH15P55291 814 aa13.99□□□□□ -0.17
DDX41-213ENST00000512027 FAM209AQ5JX71 171 aa13.99□□□□□ -0.17
DDX41-213ENST00000512027 OR2T2Q6IF00 324 aa13.99□□□□□ -0.17
DDX41-213ENST00000512027 OR2T4Q8NH00 348 aa13.99□□□□□ -0.17
DDX41-213ENST00000512027 TEX47Q8TBZ9 253 aa13.99□□□□□ -0.17
DDX41-213ENST00000512027 CCL17Q92583 94 aa13.99□□□□□ -0.17
DDX41-213ENST00000512027 POP5Q969H6 163 aaKnown RBP13.99□□□□□ -0.17
DDX41-213ENST00000512027 ATF6BQ99941 703 aa13.99□□□□□ -0.17
DDX41-213ENST00000512027 NMNAT2Q9BZQ4 307 aa13.99□□□□□ -0.17
DDX41-213ENST00000512027 COMMD3-BMI1R4GMX3 469 aa13.99□□□□□ -0.17
DDX41-213ENST00000512027 E2F6O75461 281 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms