RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 MFSD9Q8NBP5 474 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 OR10Z1Q8NGY1 313 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 ADAMTS16Q8TE57 1224 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 DTD1Q8TEA8 209 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 DYDC1Q8WWB3 177 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 TMEM37Q8WXS4 190 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 MYLPFQ96A32 169 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 PELI1Q96FA3 418 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 CELF6Q96J87 481 aaKnown RBP2.99□□□□□ -1.93
NUP54-209ENST00000510569 PPP1R36Q96LQ0 422 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 RNF145Q96MT1 663 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 SERPINB11Q96P15 392 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 IL4I1Q96RQ9 567 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 SLC22A4Q9H015 551 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 GBA3Q9H227 469 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 WDR55Q9H6Y2 383 aaPredicted RBP2.99□□□□□ -1.93
NUP54-209ENST00000510569 KAT8Q9H7Z6 458 aaKnown RBP2.99□□□□□ -1.93
NUP54-209ENST00000510569 GDF3Q9NR23 364 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 EXD2Q9NVH0 621 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 ZNF282Q9UDV7 671 aaPredicted RBP2.99□□□□□ -1.93
NUP54-209ENST00000510569 KIF25Q9UIL4 384 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 SLC22A13Q9Y226 551 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 EIF3LQ9Y262 564 aaKnown RBP2.99□□□□□ -1.93
NUP54-209ENST00000510569 TBL2Q9Y4P3 447 aaKnown RBP2.99□□□□□ -1.93
NUP54-209ENST00000510569 RGPD2P0DJD1 1756 aa2.99□□□□□ -1.93
NUP54-209ENST00000510569 EP400Q96L91 3159 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 C1orf167Q5SNV9 1468 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 COL18A1P39060 1754 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 SCN11AQ9UI33 1791 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 A0A1W2PNV4 684 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 A0A1W2PRD5 423 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 CCDC182A6NF36 153 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 F8VP50 259 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 SLC17A2O00624 439 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 ZBTB5O15062 677 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 B4GALT5O43286 388 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 XRCC2O43543 280 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 HUS1O60921 280 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 PSIP1O75475 530 aaKnown RBP2.98□□□□□ -1.93
NUP54-209ENST00000510569 CLDN9O95484 217 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 IGHV3-23P01764 117 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 GP1BAP07359 652 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 GNAO1P09471 354 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 HOXB7P09629 217 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 OCM2P0CE71 109 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 COX5BP10606 129 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 MYL2P10916 166 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 PGAM1P18669 254 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 DTYMKP23919 212 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 CMA1P23946 247 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 G0S2P27469 103 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 HLA-DMAP28067 261 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 CRABP2P29373 138 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 PRDX3P30048 256 aaKnown RBP2.98□□□□□ -1.93
NUP54-209ENST00000510569 KDELR2P33947 212 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 EPHX2P34913 555 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 ACVR1BP36896 505 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 CEACAM3P40198 252 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 AQP2P41181 271 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 GEMP55040 296 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 MLF1P58340 268 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 RAB10P61026 200 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 ERVS71-1P61550 626 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 SERTAD2Q14140 314 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 EXOSC7Q15024 291 aaKnown RBP2.98□□□□□ -1.93
NUP54-209ENST00000510569 TRAM2Q15035 370 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 PRR4Q16378 134 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 KLHL38Q2WGJ6 581 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 COX19Q49B96 90 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 ACSF3Q4G176 576 aaPredicted RBP2.98□□□□□ -1.93
NUP54-209ENST00000510569 CCDC58Q4VC31 144 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 PIGGQ5H8A4 983 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 BEND3Q5T5X7 828 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 SPOPLQ6IQ16 392 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 STOX1Q6ZVD7 989 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 SMIM15Q7Z3B0 74 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 CLDN19Q8N6F1 224 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 CSNK1A1LQ8N752 337 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.98□□□□□ -1.93
NUP54-209ENST00000510569 CCDC71LQ8N9Z2 235 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 INO80EQ8NBZ0 244 aaPredicted RBP2.98□□□□□ -1.93
NUP54-209ENST00000510569 B3GNT7Q8NFL0 401 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 OR4L1Q8NH43 312 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 WDR36Q8NI36 951 aaKnown RBP2.98□□□□□ -1.93
NUP54-209ENST00000510569 LGALS14Q8TCE9 139 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 SRSF12Q8WXF0 261 aaKnown RBP2.98□□□□□ -1.93
NUP54-209ENST00000510569 ACOT11Q8WXI4 607 aaPredicted RBP2.98□□□□□ -1.93
NUP54-209ENST00000510569 NTAN1Q96AB6 310 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 CEP170P1Q96L14 293 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 DEFB118Q96PH6 123 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 OR5B2Q96R09 309 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 FAM173AQ9BQD7 235 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 NICN1Q9BSH3 213 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 RSG1Q9BU20 258 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 ZNF426Q9BUY5 554 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 FUNDC2Q9BWH2 189 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 SCRT1Q9BWW7 348 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 MAP1LC3CQ9BXW4 147 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 ULBP2Q9BZM5 246 aa2.98□□□□□ -1.93
NUP54-209ENST00000510569 SLC25A19Q9HC21 320 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms