RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 IGKV3-11P04433 115 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 CRYBA1P05813 215 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 CD79BP40259 229 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 ESCO2Q56NI9 601 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 EXOSC6Q5RKV6 272 aaKnown RBP4.57□□□□□ -1.68
PHF3-210ENST00000509876 SLC38A9Q8NBW4 561 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 RFT1Q96AA3 541 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 DUS3LQ96G46 650 aaKnown RBP4.57□□□□□ -1.68
PHF3-210ENST00000509876 CMSS1Q9BQ75 279 aaKnown RBP4.57□□□□□ -1.68
PHF3-210ENST00000509876 TMEM59Q9BXS4 323 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 SEMA5BQ9P283 1151 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 MGAT4AQ9UM21 535 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 UBE2J1Q9Y385 318 aaPredicted RBP4.57□□□□□ -1.68
PHF3-210ENST00000509876 ACOD1A6NK06 481 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 NCR1O76036 304 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 BGLAPP02818 100 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 ZNF32P17041 273 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 HTR2AP28223 471 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 GABRA5P31644 462 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 ZNF121P58317 390 aaPredicted RBP4.57□□□□□ -1.68
PHF3-210ENST00000509876 SLC17A1Q14916 467 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 CDK10Q15131 360 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 CEBPEQ15744 281 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 TBCEQ15813 527 aaPredicted RBP4.57□□□□□ -1.68
PHF3-210ENST00000509876 PAN3Q58A45 887 aaKnown RBP4.57□□□□□ -1.68
PHF3-210ENST00000509876 IL1F10Q8WWZ1 152 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 GOLGA4Q13439 2230 aaKnown RBP4.57□□□□□ -1.68
PHF3-210ENST00000509876 GON4LQ3T8J9 2241 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 TRAV18A0A075B6X5 111 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 ZAR1LA6NP61 321 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 HNRNPCP07910 306 aaKnown RBP eCLIP4.57□□□□□ -1.683e-8■■■□□ 16.7
PHF3-210ENST00000509876 PIPP12273 146 aaPredicted RBP4.57□□□□□ -1.68
PHF3-210ENST00000509876 PTAFRP25105 342 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 RAB12Q6IQ22 244 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 UGT2A3Q6UWM9 527 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 SLC36A1Q7Z2H8 476 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 ZBTB46Q86UZ6 589 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 CCDC71Q8IV32 467 aaPredicted RBP4.57□□□□□ -1.68
PHF3-210ENST00000509876 FAM26EQ8N5C1 309 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 FAM71CQ8NEG0 241 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 OR4D6Q8NGJ1 314 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 UTP4Q969X6 686 aaKnown RBP4.57□□□□□ -1.68
PHF3-210ENST00000509876 OPALINQ96PE5 141 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 CCL19Q99731 98 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 OCSTAMPQ9BR26 566 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 MMP27Q9H306 513 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 MS4A5Q9H3V2 200 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 ZCCHC4Q9H5U6 513 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 ZNF552Q9H707 407 aaPredicted RBP4.57□□□□□ -1.68
PHF3-210ENST00000509876 GPR84Q9NQS5 396 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 ASF1BQ9NVP2 202 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 SIGLEC7Q9Y286 467 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 CHD5Q8TDI0 1954 aa4.57□□□□□ -1.68
PHF3-210ENST00000509876 ANKRD61A6NGH8 418 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 CLDN14O95500 239 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 HLA-HP01893 362 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 HOXB1P14653 301 aaPredicted RBP4.56□□□□□ -1.68
PHF3-210ENST00000509876 CPT2P23786 658 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 APEX1P27695 318 aaKnown RBP4.56□□□□□ -1.68
PHF3-210ENST00000509876 SEC61A1P61619 476 aaKnown RBP4.56□□□□□ -1.68
PHF3-210ENST00000509876 EDDM3AQ14507 147 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 ZNF774Q6NX45 483 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 CLEC2AQ6UVW9 174 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 B3GLCTQ6Y288 498 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 CREB3L2Q70SY1 520 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 Q8IYB0 196 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 GPR32P1Q8NGA4 272 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 SLC6A7Q99884 636 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 ST6GALNAC5Q9BVH7 336 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 CXXC4Q9H2H0 198 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 NOX4Q9NPH5 578 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 B3GNT2Q9NY97 397 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 PSORS1C1Q9UIG5 152 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 A0A0J9YW62 118 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 A0A1W2PQL4 384 aaPredicted RBP4.56□□□□□ -1.68
PHF3-210ENST00000509876 J3QRK9 145 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 FXYD1O00168 92 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 SMPD2O60906 423 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 TSC22D2O75157 780 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 BPNT1O95861 308 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 SCGB1D2O95969 90 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 VAMP1P23763 118 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 PRSS3P35030 304 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 SELENOPP49908 381 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 FUT6P51993 359 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 TBRG1Q3YBR2 411 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 ZNF658BQ4V348 819 aaPredicted RBP4.56□□□□□ -1.68
PHF3-210ENST00000509876 UBE2NLQ5JXB2 153 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 ZAR1Q86SH2 424 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 SYS1Q8N2H4 156 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 C17orf78Q8N4C9 275 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 APCDD1LQ8NCL9 501 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 OR1M1Q8NGA1 313 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 NDNFQ8TB73 568 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 TMEM106AQ96A25 262 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 ZG16BQ96DA0 208 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 DIRC2Q96SL1 478 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 DOK1Q99704 481 aa4.56□□□□□ -1.68
PHF3-210ENST00000509876 NKX3-1Q99801 234 aaPredicted RBP4.56□□□□□ -1.68
PHF3-210ENST00000509876 SELENOIQ9C0D9 397 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms