RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 C1RP00736 705 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 SEC11BP0C7V7 166 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 HIST1H1EP10412 219 aaKnown RBP3.28□□□□□ -1.88
USP53-205ENST00000509769 EDN3P14138 238 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 ENPP1P22413 925 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 AQP1P29972 269 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 ACVR1BP36896 505 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 CCR5P51681 352 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 SNU13P55769 128 aaKnown RBP3.28□□□□□ -1.88
USP53-205ENST00000509769 WNT7BP56706 349 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 MS4A2Q01362 244 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 TPBGQ13641 420 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 ELOCQ15369 112 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 TWIST1Q15672 202 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 NHSL2Q5HYW2 709 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 PRAMEF14Q5SWL7 426 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 SAXO2Q658L1 398 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 DHRS7BQ6IAN0 325 aaPredicted RBP3.28□□□□□ -1.88
USP53-205ENST00000509769 GLRX5Q86SX6 157 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 GPR135Q8IZ08 494 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 UBE2FQ969M7 185 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 NXPE3Q969Y0 559 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 NEIL1Q96FI4 390 aaPredicted RBP3.28□□□□□ -1.88
USP53-205ENST00000509769 GRAMD2BQ96HH9 432 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 BOD1Q96IK1 185 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 SLC35E1Q96K37 410 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 OR4C12Q96R67 309 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 ZIC5Q96T25 663 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 SLC25A2Q9BXI2 301 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 KCND3Q9UK17 655 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 OARD1Q9Y530 152 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 CSAG2Q9Y5P2 127 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 OR4C45A6NMZ5 311 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 DIRC3C9JPN6 131 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 TAPBPO15533 448 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 PEX10O60683 326 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 HLA-DQA1P01909 254 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 AHSGP02765 367 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 PRNPP04156 253 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 ICAM1P05362 532 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 ARAFP10398 606 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 F3P13726 295 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 HIST1H1TP22492 207 aaPredicted RBP3.28□□□□□ -1.88
USP53-205ENST00000509769 HTR1DP28221 377 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 MPGP29372 298 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 TIA1P31483 386 aaKnown RBP eCLIP3.28□□□□□ -1.88
USP53-205ENST00000509769 CNR2P34972 360 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 CD200P41217 278 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 HTR5AP47898 357 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 EVX1P49640 407 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 TNFSF10P50591 281 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 CKS1BP61024 79 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 RPL7AP62424 266 aaKnown RBP3.28□□□□□ -1.88
USP53-205ENST00000509769 MEF2AQ02078 507 aaPredicted RBP3.28□□□□□ -1.88
USP53-205ENST00000509769 ACVR1Q04771 509 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 DUSP8Q13202 625 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 OLIG2Q13516 323 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 ZYXQ15942 572 aaKnown RBP3.28□□□□□ -1.88
USP53-205ENST00000509769 ARSIQ5FYB1 569 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 C9orf152Q5JTZ5 239 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 USP17L6PQ6QN14 398 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 OLIG3Q7RTU3 272 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 PRICKLE2Q7Z3G6 844 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 TRAPPC6BQ86SZ2 158 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 DOLPP1Q86YN1 238 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 RBM45Q8IUH3 476 aaKnown RBP3.28□□□□□ -1.88
USP53-205ENST00000509769 NKAIN4Q8IVV8 208 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 ATOH7Q8N100 152 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 TMEM102Q8N9M5 508 aaPredicted RBP3.28□□□□□ -1.88
USP53-205ENST00000509769 OR4X2Q8NGF9 303 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 GPR152Q8TDT2 470 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 SMIM4Q8WVI0 70 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 NRG4Q8WWG1 115 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 BCL2L2Q92843 193 aaPredicted RBP3.28□□□□□ -1.88
USP53-205ENST00000509769 TMEM125Q96AQ2 219 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 PLD4Q96BZ4 506 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 YIPF6Q96EC8 236 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 SPACA7Q96KW9 195 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 PWWP2AQ96N64 755 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 OR2V2Q96R30 315 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 OR2A14Q96R47 310 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 TBX5Q99593 518 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 OVOL2Q9BRP0 275 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 NMES1Q9C002 83 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 CALHM2Q9HA72 323 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 EHFQ9NZC4 300 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 NDOR1Q9UHB4 597 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 MAP2P11137 1827 aaKnown RBP3.28□□□□□ -1.88
USP53-205ENST00000509769 A6NL46 340 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 SLC38A8A6NNN8 435 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 FOXE1O00358 373 aaPredicted RBP3.28□□□□□ -1.88
USP53-205ENST00000509769 KLRC4O43908 158 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 GPR32O75388 356 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 GAPDHP04406 335 aaKnown RBP3.28□□□□□ -1.88
USP53-205ENST00000509769 CTSAP10619 480 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 ACHEP22303 614 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 TOB1P50616 345 aaPredicted RBP3.28□□□□□ -1.88
USP53-205ENST00000509769 GAMTQ14353 236 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 FRMPD2BQ6IN97 320 aa3.28□□□□□ -1.88
USP53-205ENST00000509769 FAM71E1Q6IPT2 247 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms