RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 CD48P09326 243 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 WNT2P09544 360 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 SLC35G4P0C7Q5 338 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 IL7P13232 177 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 ARSBP15848 533 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 ZNF43P17038 809 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 CD72P21854 359 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 HMGB2P26583 209 aaKnown RBP3.98□□□□□ -1.77
NIPBL-206ENST00000509429 AK4P27144 223 aaPredicted RBP3.98□□□□□ -1.77
NIPBL-206ENST00000509429 EPHA2P29317 976 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 HTR1FP30939 366 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 OR3A1P47881 315 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 AGTR2P50052 363 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 CDH12P55289 794 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 NXPH1P58417 271 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 RAB5BP61020 215 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 MRPS10P82664 201 aaKnown RBP3.98□□□□□ -1.77
NIPBL-206ENST00000509429 ZXDBP98169 803 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 MYL5Q02045 173 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 CD47Q08722 323 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 SLC10A2Q12908 348 aaPredicted RBP3.98□□□□□ -1.77
NIPBL-206ENST00000509429 TRAF3Q13114 568 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 NFATC2Q13469 925 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 SYPL1Q16563 259 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 ISXQ2M1V0 245 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 PARP15Q460N3 678 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 OCIAD2Q56VL3 154 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 SFT2D3Q587I9 215 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 TMEM128Q5BJH2 165 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 Q5BKY6 102 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 TMEM196Q5HYL7 178 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 C6orf52Q5T4I8 152 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 AVPI1Q5T686 147 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 FAM78BQ5VT40 261 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 PRAMEF17Q5VTA0 474 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 AGAP6Q5VW22 663 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 LIPKQ5VXJ0 399 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 STEAP4Q687X5 459 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 STUMQ69YW2 141 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 TBC1D3CQ6IPX1 549 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 GJB7Q6PEY0 223 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 DCUN1D2Q6PH85 259 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 TEX261Q6UWH6 196 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 BTNL8Q6UX41 500 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 CASP12Q6UXS9 341 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 SEM1Q6ZVN7 128 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 SSX6Q7RTT6 188 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 ZNF367Q7RTV3 350 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 WDR53Q7Z5U6 358 aaPredicted RBP3.98□□□□□ -1.77
NIPBL-206ENST00000509429 NRARPQ7Z6K4 114 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 TMPRSS11BQ86T26 416 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 NIT1Q86X76 327 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 BAP18Q8IXM2 172 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 TBC1D3Q8IZP1 549 aaPredicted RBP3.98□□□□□ -1.77
NIPBL-206ENST00000509429 C8orf59Q8N0T1 100 aaPredicted RBP3.98□□□□□ -1.77
NIPBL-206ENST00000509429 SMIM20Q8N5G0 67 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 PNLDC1Q8NA58 520 aaKnown RBP3.98□□□□□ -1.77
NIPBL-206ENST00000509429 OR4A4PQ8NGN8 299 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 OR2AE1Q8NHA4 323 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 NPRL2Q8WTW4 380 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 SKA2Q8WVK7 121 aaPredicted RBP3.98□□□□□ -1.77
NIPBL-206ENST00000509429 DEDD2Q8WXF8 326 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 S100ZQ8WXG8 99 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 TFAP2BQ92481 460 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 GGHQ92820 318 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 TOMM40LQ969M1 308 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 ISOC2Q96AB3 205 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 RPEQ96AT9 228 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 MOAP1Q96BY2 351 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 FLYWCH2Q96CP2 140 aaKnown RBP3.98□□□□□ -1.77
NIPBL-206ENST00000509429 CMBLQ96DG6 245 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 PYURFQ96I23 114 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 ITCHQ96J02 903 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 CNBD2Q96M20 576 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 ZNF582Q96NG8 517 aaPredicted RBP3.98□□□□□ -1.77
NIPBL-206ENST00000509429 AGAP4Q96P64 663 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 GPR78Q96P69 363 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 NODALQ96S42 347 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 DOK1Q99704 481 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 CBWD1Q9BRT8 395 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 H2AFJQ9BTM1 129 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 URM1Q9BTM9 101 aaKnown RBP3.98□□□□□ -1.77
NIPBL-206ENST00000509429 RIOK2Q9BVS4 552 aaKnown RBP3.98□□□□□ -1.77
NIPBL-206ENST00000509429 QTRT1Q9BXR0 403 aaKnown RBP3.98□□□□□ -1.77
NIPBL-206ENST00000509429 TXNIPQ9H3M7 391 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 GSTO2Q9H4Y5 243 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 LRTM1Q9HBL6 345 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 SLCO1B3Q9NPD5 702 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 ELOVL5Q9NYP7 299 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 THAP10Q9P2Z0 257 aaPredicted RBP3.98□□□□□ -1.77
NIPBL-206ENST00000509429 SLC17A4Q9Y2C5 497 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 SLC35A3Q9Y2D2 325 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 MYO5AQ9Y4I1 1855 aaKnown RBP3.98□□□□□ -1.77
NIPBL-206ENST00000509429 DOCK2Q92608 1830 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 WNK3Q9BYP7 1800 aa3.98□□□□□ -1.77
NIPBL-206ENST00000509429 ABCB11O95342 1321 aa3.97□□□□□ -1.77
NIPBL-206ENST00000509429 LRP6O75581 1613 aa3.97□□□□□ -1.77
NIPBL-206ENST00000509429 A0A096LPI6 279 aa3.97□□□□□ -1.77
NIPBL-206ENST00000509429 KIR2DL5BA0A0G2JN68 375 aa3.97□□□□□ -1.77
NIPBL-206ENST00000509429 KIR2DL5BA0A0G2JPC4 375 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms