RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 TSFMP43897 325 aaKnown RBP3.5□□□□□ -1.85
NEDD4-209ENST00000508871 TPBGQ13641 420 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 CDK10Q15131 360 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 TAL2Q16559 108 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 SPANXN3Q5MJ09 141 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 FAM198BQ6UWH4 519 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 BHLHA9Q7RTU4 235 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 TGIF2LYQ8IUE0 185 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 FTMTQ8N4E7 242 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 DTWD1Q8N5C7 304 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 LINC01599Q8WXQ3 324 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 CACNG8Q8WXS5 425 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 EGLN2Q96KS0 407 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 SGK494Q96LW2 274 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 GPR137Q96N19 417 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 SLC25A31Q9H0C2 315 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 MVB12BQ9H7P6 319 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 DDX31Q9H8H2 851 aaKnown RBP3.5□□□□□ -1.85
NEDD4-209ENST00000508871 ERGIC3Q9Y282 383 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 ORC6Q9Y5N6 252 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 GBF1Q92538 1859 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 TRAV24A0A0B4J272 114 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 A0A1B0GTI1 187 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 A0A1W2PQL4 384 aaPredicted RBP3.5□□□□□ -1.85
NEDD4-209ENST00000508871 RNASET2O00584 256 aaKnown RBP3.5□□□□□ -1.85
NEDD4-209ENST00000508871 TRAF3IP2O43734 574 aaPredicted RBP3.5□□□□□ -1.85
NEDD4-209ENST00000508871 FADS1O60427 444 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 PLIN3O60664 434 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 CRABP1P29762 137 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 FOXL2P58012 376 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 EMC4Q5J8M3 183 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 TRNP1Q6NT89 227 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 FAHD2BQ6P2I3 314 aaPredicted RBP3.5□□□□□ -1.85
NEDD4-209ENST00000508871 TIFABQ6ZNK6 161 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 GDPD3Q7L5L3 318 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 NAA40Q86UY6 237 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 ENTHD1Q8IYW4 607 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 COX18Q8N8Q8 333 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 EXD3Q8N9H8 876 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 NR4A3Q92570 626 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 TMEM18Q96B42 140 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 ZBED6CLQ96FA7 236 aaPredicted RBP3.5□□□□□ -1.85
NEDD4-209ENST00000508871 MRAP2Q96G30 205 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 FAHD2AQ96GK7 314 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF599Q96NL3 588 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 NPAS1Q99742 590 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 CDC42EP4Q9H3Q1 356 aaKnown RBP3.5□□□□□ -1.85
NEDD4-209ENST00000508871 TPT1P8Q9HAU6 139 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 PHPT1Q9NRX4 125 aaPredicted RBP3.5□□□□□ -1.85
NEDD4-209ENST00000508871 FZD4Q9ULV1 537 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 SNX24Q9Y343 169 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 RPL36Q9Y3U8 105 aaKnown RBP3.5□□□□□ -1.85
NEDD4-209ENST00000508871 WNT6Q9Y6F9 365 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 ATG2AQ2TAZ0 1938 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 SCN5AQ14524 2016 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF638Q14966 1978 aaKnown RBP3.5□□□□□ -1.85
NEDD4-209ENST00000508871 FAM172BPA6NC97 362 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 ATP6V1G2-DDX39BF2Z307 99 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 GAPDHSO14556 408 aaPredicted RBP3.5□□□□□ -1.85
NEDD4-209ENST00000508871 MRASO14807 208 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 PTHP01270 115 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 PRSS2P07478 247 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 H2BFMP0C1H6 154 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 OR4A8P0C604 315 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 SDC1P18827 310 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 IFNGR2P38484 337 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 IDH3GP51553 393 aaPredicted RBP3.5□□□□□ -1.85
NEDD4-209ENST00000508871 MTPNP58546 118 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 ACTBP60709 375 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 ACTG1P63261 375 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 TNXAQ16473 311 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 NRF1Q16656 503 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 SLC35D3Q5M8T2 416 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 NXNL2Q5VZ03 156 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 MAVSQ7Z434 540 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 YTHDF3Q7Z739 585 aaKnown RBP3.5□□□□□ -1.85
NEDD4-209ENST00000508871 PIM3Q86V86 326 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 DEFB106AQ8N104 65 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 IL17FQ96PD4 163 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 FCRL5Q96RD9 977 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 ECSITQ9BQ95 431 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 CDCA4Q9BXL8 241 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 IGLV3-10A0A075B6K4 115 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 PRORSD1PA6NEY8 169 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 TRDCB7Z8K6 153 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 SLCO1B7G3V0H7 640 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 CBR3O75828 277 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 NDUFC2O95298 119 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 SLC2A10O95528 541 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 CXCL14O95715 111 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 ESR1P03372 595 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 SRD5A1P18405 259 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 AOC1P19801 751 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 GLP1RP43220 463 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 CTAG1AP78358 180 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 IRF8Q02556 426 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 SPIN4Q56A73 249 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 ATP1A1-AS1Q5TC04 95 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 Q6ZWC4 215 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 NET1Q7Z628 596 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms