RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 AMELYQ99218 206 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 PHB2Q99623 299 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 HIST1H2BLQ99880 126 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 PARD6GQ9BYG4 376 aaPredicted RBP6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 WNT5BQ9H1J7 359 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 EPHX3Q9H6B9 360 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 PRDM7Q9NQW5 492 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 KLHL28Q9NXS3 571 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 CHD7Q9P2D1 2997 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 ABT1Q9ULW3 272 aaKnown RBP6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 KCNIP3Q9Y2W7 256 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 SLC5A10A0PJK1 596 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 C17orf102A2RUQ5 167 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 DUS4LO95620 317 aaKnown RBP6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 THBS1P07996 1170 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 GZMBP10144 247 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 LAMP2P13473 410 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 MAOAP21397 527 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 OMGP23515 440 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 BSGP35613 385 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 DVL1P1P54792 670 aaPredicted RBP6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 TMEM115Q12893 351 aaPredicted RBP6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 PPA1Q15181 289 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 TDRG1Q3Y452 100 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 VWA2Q5GFL6 755 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 DPY19L4Q7Z388 723 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 ZAR1Q86SH2 424 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 SLC30A7Q8NEW0 376 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 ERGIC1Q969X5 290 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 CNN2Q99439 309 aaKnown RBP6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 PRSS27Q9BQR3 290 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 WDR76Q9H967 626 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 CMC2Q9NRP2 79 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 CALML5Q9NZT1 146 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 SEMA5BQ9P283 1151 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 LAMP5Q9UJQ1 280 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 HIF3AQ9Y2N7 669 aa6.54□□□□□ -1.36
LIMCH1-207ENST00000508466 CBY3A6NI87 242 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 FAM157AC9JC47 383 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 MASP2O00187 686 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 ERI3O43414 337 aaKnown RBP6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 ITGA10O75578 1167 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 TRAPPC6AO75865 159 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 STK17BO94768 372 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 C1orf105O95561 183 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 CD8AP01732 235 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 HLA-DQA2P01906 255 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 TYRP1P17643 537 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 GDI1P31150 447 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 CAMLGP49069 296 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 OR5I1Q13606 314 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 LEG1Q6P5S2 330 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 TEX38Q6PEX7 206 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 LINC01555Q8NAE3 123 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 OR5T1Q8NG75 326 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 SUN3Q8TAQ9 357 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 FAM213BQ8TBF2 198 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 CYB5D2Q8WUJ1 264 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 LGR4Q9BXB1 951 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 METTL9Q9H1A3 318 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 TMEM100Q9NV29 134 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 PRODH2Q9UF12 536 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 DIDO1Q9BTC0 2240 aaKnown RBP6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 A0A1B0GTI1 187 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 A0A1W2PR48 441 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 PRSS47A8MTI9 375 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 TMEM189-UBE2V1I3L0A0 370 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 MFNGO00587 321 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 OGG1O15527 345 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 DIRAS3O95661 229 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 SCGB1D1O95968 90 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 ZBTB25P24278 435 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 NDUFS1P28331 727 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 SERPINA4P29622 427 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 CLDN17P56750 224 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 TAS2R38P59533 333 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 EGR3Q06889 387 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 DUSP28Q4G0W2 176 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 TRMT12Q53H54 448 aaKnown RBP6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 RNASE10Q5GAN6 216 aaKnown RBP6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 SOHLH1Q5JUK2 328 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 AADACL3Q5VUY0 350 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 RPL22L1Q6P5R6 122 aaKnown RBP6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 TPRG1Q6ZUI0 275 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 MTSS1LQ765P7 747 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 UBE3DQ7Z6J8 389 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 OR2L13Q8N349 312 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 GPR137CQ8N3F9 429 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 PIP4P2Q8N4L2 257 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 OR2L2Q8NH16 312 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 ADAMTS18Q8TE60 1221 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 TFGQ92734 400 aaPredicted RBP6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 RAB39BQ96DA2 213 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 PHYHIPLQ96FC7 376 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 GNRHR2Q96P88 292 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 MESP1Q9BRJ9 268 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 FAAP24Q9BTP7 215 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 SIGLEC7Q9Y286 467 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 DOCK11Q5JSL3 2073 aa6.53□□□□□ -1.36
LIMCH1-207ENST00000508466 KDM4FA0A1W2PPD8 638 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms