RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 ZNF347Q96SE7 839 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 PIP5K1AQ99755 562 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 DHRS9Q9BPW9 319 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 TRAF4Q9BUZ4 470 aaPredicted RBP3.91□□□□□ -1.78
NUP54-206ENST00000508465 CACNG6Q9BXT2 260 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 LINC00470Q9BZP3 86 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 EVA1AQ9H8M9 152 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 FKRPQ9H9S5 495 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 NMNAT1Q9HAN9 279 aaPredicted RBP3.91□□□□□ -1.78
NUP54-206ENST00000508465 NOX3Q9HBY0 568 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 MAN2C1Q9NTJ4 1040 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 MRGBPQ9NV56 204 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 B3GNT2Q9NY97 397 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 GLTPQ9NZD2 209 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 ZNF229Q9UJW7 825 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 RCE1Q9Y256 329 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 AP3M1Q9Y2T2 418 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 AMDHD2Q9Y303 409 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 MED31Q9Y3C7 131 aa3.91□□□□□ -1.78
NUP54-206ENST00000508465 FLNAP21333 2647 aaKnown RBP3.91□□□□□ -1.78
NUP54-206ENST00000508465 MTORP42345 2549 aa3.9□□□□□ -1.78
NUP54-206ENST00000508465 TRAV27A0A087WT01 109 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 A0A087WUU8 490 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 TRBV4-1A0A0J9YWV2 114 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 A0A1W2PRG6 482 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 OR6C65A6NJZ3 312 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 ZNF99A8MXY4 864 aaPredicted RBP3.9□□□□□ -1.79
NUP54-206ENST00000508465 EFCAB9A8MZ26 197 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 GMNNO75496 209 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 TRMUO75648 421 aaKnown RBP3.9□□□□□ -1.79
NUP54-206ENST00000508465 SLC2A10O95528 541 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 BCL10O95999 233 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 IFNW1P05000 195 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 SAGP10523 405 aaPredicted RBP3.9□□□□□ -1.79
NUP54-206ENST00000508465 CCL2P13500 99 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 B4GALT1P15291 398 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 CBR1P16152 277 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 ACADSP16219 412 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 ZNF26P17031 533 aaPredicted RBP3.9□□□□□ -1.79
NUP54-206ENST00000508465 PRDX6P30041 224 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 TTKP33981 857 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 SERPINF1P36955 418 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 RBM34P42696 430 aaKnown RBP3.9□□□□□ -1.79
NUP54-206ENST00000508465 GPR4P46093 362 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 PTDSS1P48651 473 aaKnown RBP3.9□□□□□ -1.79
NUP54-206ENST00000508465 ERVK-25P63136 954 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 NAAAQ02083 359 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 ST3GAL3Q11203 375 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 TRAM2Q15035 370 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 SEC23BQ15437 767 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 SGCAQ16586 387 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 CLEC12BQ2HXU8 276 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 IFI44LQ53G44 452 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 AWAT1Q58HT5 328 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 AGAP6Q5VW22 663 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 SHEQ5VZ18 495 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 OTPQ5XKR4 325 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 MZT2BQ6NZ67 158 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 CFAP161Q6P656 301 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 ZNF730Q6ZMV8 503 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 ARPINQ7Z6K5 226 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 OAFQ86UD1 273 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 LRP11Q86VZ4 500 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 NRMQ8IXM6 262 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 DEFB107AQ8IZN7 70 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 MUC15Q8N387 334 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 LRRC18Q8N456 261 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 C17orf78Q8N4C9 275 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 ADPRHL1Q8NDY3 354 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 OR4K5Q8NGD3 323 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 OR13C2Q8NGS9 318 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 OR6X1Q8NH79 312 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 GEMIN6Q8WXD5 167 aaKnown RBP3.9□□□□□ -1.79
NUP54-206ENST00000508465 NSMAFQ92636 917 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 MCHR2Q969V1 340 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 NMD3Q96D46 503 aaKnown RBP3.9□□□□□ -1.79
NUP54-206ENST00000508465 SLC25A44Q96H78 314 aaPredicted RBP3.9□□□□□ -1.79
NUP54-206ENST00000508465 NSL1Q96IY1 281 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 C18orf12Q96KH6 178 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 C7orf34Q96L11 122 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 LRR1Q96L50 414 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 FOXN4Q96NZ1 517 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 SLC38A2Q96QD8 506 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 GPA33Q99795 319 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 KCNS3Q9BQ31 491 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 ZNF426Q9BUY5 554 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 ULBP2Q9BZM5 246 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 SLC19A3Q9BZV2 496 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 NSRP1Q9H0G5 558 aaKnown RBP3.9□□□□□ -1.79
NUP54-206ENST00000508465 OR51B6Q9H340 312 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 CXorf56Q9H5V9 222 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 SPAG4Q9NPE6 437 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 B3GAT2Q9NPZ5 323 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 INIPQ9NRY2 104 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 DCAF13Q9NV06 445 aaKnown RBP3.9□□□□□ -1.79
NUP54-206ENST00000508465 NDUFAF4Q9P032 175 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 CD300AQ9UGN4 299 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 IL20RAQ9UHF4 553 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 ZNF346Q9UL40 294 aaKnown RBP3.9□□□□□ -1.79
NUP54-206ENST00000508465 FZR1Q9UM11 496 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms