RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 SLC25A14O95258 325 aaPredicted RBP2.01□□□□□ -2.09
LSM6-205ENST00000507449 PPP1CBP62140 327 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 ARG2P78540 354 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 QPRTQ15274 297 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 TWF2Q6IBS0 349 aaKnown RBP2.01□□□□□ -2.09
LSM6-205ENST00000507449 PRMT9Q6P2P2 845 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 TTC23LQ6PF05 361 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 SPESP1Q6UW49 350 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 C12orf54Q6X4T0 127 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 MBOAT2Q6ZWT7 520 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 SSX9Q7RTT3 188 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 KATNAL2Q8IYT4 538 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 METTL13Q8N6R0 699 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 BPIFCQ8NFQ6 507 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 PIFOQ8TCI5 191 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 APH1BQ8WW43 257 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 NTAN1Q96AB6 310 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 RNF145Q96MT1 663 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 NDFIP1Q9BT67 221 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 EDA2RQ9HAV5 297 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 CCNB1IP1Q9NPC3 277 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 AHSPQ9NZD4 102 aa2.01□□□□□ -2.09
LSM6-205ENST00000507449 RABL2AQ9UBK7 228 aaPredicted RBP2.01□□□□□ -2.09
LSM6-205ENST00000507449 RCL1Q9Y2P8 373 aaKnown RBP2.01□□□□□ -2.09
LSM6-205ENST00000507449 TET2Q6N021 2002 aaPredicted RBP2.01□□□□□ -2.09
LSM6-205ENST00000507449 WDR19Q8NEZ3 1342 aa2□□□□□ -2.09
LSM6-205ENST00000507449 IGKV1-8A0A0C4DH67 115 aa2□□□□□ -2.09
LSM6-205ENST00000507449 HBE1P02100 147 aa2□□□□□ -2.09
LSM6-205ENST00000507449 CTSLP07711 333 aa2□□□□□ -2.09
LSM6-205ENST00000507449 MRPL3P09001 348 aaKnown RBP2□□□□□ -2.09
LSM6-205ENST00000507449 CLTAP09496 248 aa2□□□□□ -2.09
LSM6-205ENST00000507449 ERGP11308 486 aa2□□□□□ -2.09
LSM6-205ENST00000507449 PSMC3P17980 439 aa2□□□□□ -2.09
LSM6-205ENST00000507449 EIF2S2P20042 333 aaKnown RBP2□□□□□ -2.09
LSM6-205ENST00000507449 WARSP23381 471 aaKnown RBP2□□□□□ -2.09
LSM6-205ENST00000507449 SSTR5P35346 364 aa2□□□□□ -2.09
LSM6-205ENST00000507449 SLC1A2P43004 574 aa2□□□□□ -2.09
LSM6-205ENST00000507449 RPS15AP62244 130 aaKnown RBP2□□□□□ -2.09
LSM6-205ENST00000507449 IL18Q14116 193 aa2□□□□□ -2.09
LSM6-205ENST00000507449 IRF4Q15306 451 aa2□□□□□ -2.09
LSM6-205ENST00000507449 ORMDL2Q53FV1 153 aa2□□□□□ -2.09
LSM6-205ENST00000507449 ZNF684Q5T5D7 378 aa2□□□□□ -2.09
LSM6-205ENST00000507449 ABHD12BQ7Z5M8 362 aaPredicted RBP2□□□□□ -2.09
LSM6-205ENST00000507449 C8orf31Q8N9H6 132 aa2□□□□□ -2.09
LSM6-205ENST00000507449 CHST4Q8NCG5 386 aa2□□□□□ -2.09
LSM6-205ENST00000507449 OR6N1Q8NGY5 312 aa2□□□□□ -2.09
LSM6-205ENST00000507449 OR8U1Q8NH10 309 aa2□□□□□ -2.09
LSM6-205ENST00000507449 AGR3Q8TD06 166 aa2□□□□□ -2.09
LSM6-205ENST00000507449 ESR2Q92731 530 aa2□□□□□ -2.09
LSM6-205ENST00000507449 FRZBQ92765 325 aa2□□□□□ -2.09
LSM6-205ENST00000507449 RBMXL1Q96E39 390 aaKnown RBP2□□□□□ -2.09
LSM6-205ENST00000507449 GSDMAQ96QA5 445 aa2□□□□□ -2.09
LSM6-205ENST00000507449 ZYG11BQ9C0D3 744 aa2□□□□□ -2.09
LSM6-205ENST00000507449 HMG20AQ9NP66 347 aa2□□□□□ -2.09
LSM6-205ENST00000507449 FAM49BQ9NUQ9 324 aa2□□□□□ -2.09
LSM6-205ENST00000507449 CLN6Q9NWW5 311 aa2□□□□□ -2.09
LSM6-205ENST00000507449 ZNRD1Q9P1U0 126 aa2□□□□□ -2.09
LSM6-205ENST00000507449 CTSFQ9UBX1 484 aa2□□□□□ -2.09
LSM6-205ENST00000507449 ZNF282Q9UDV7 671 aaPredicted RBP2□□□□□ -2.09
LSM6-205ENST00000507449 DENND4AQ7Z401 1863 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 TTC41PQ6P2S7 1318 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 TMEM223A0PJW6 202 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 A6NDN8 102 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 DNASE2O00115 360 aaPredicted RBP1.99□□□□□ -2.09
LSM6-205ENST00000507449 GABRPO00591 440 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 CASQ2O14958 399 aaPredicted RBP1.99□□□□□ -2.09
LSM6-205ENST00000507449 ZBTB5O15062 677 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 RAD51BO15315 384 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 NVLO15381 856 aaKnown RBP1.99□□□□□ -2.09
LSM6-205ENST00000507449 SOCS1O15524 211 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 NMT2O60551 498 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 FCN3O75636 299 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 YIF1AO95070 293 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 LSM8O95777 96 aaKnown RBP1.99□□□□□ -2.09
LSM6-205ENST00000507449 HLA-HP01893 362 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 IFNW1P05000 195 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 ADRA2AP08913 450 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 RHOXF2BP0C7M4 288 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 CISD3P0C7P0 127 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 RAB3AP20336 220 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 RAB4AP20338 218 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 TUBG1P23258 451 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 HMOX2P30519 316 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 HCAR3P49019 387 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 P2RX1P51575 399 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 UBE2NP61088 152 aaKnown RBP1.99□□□□□ -2.09
LSM6-205ENST00000507449 SNRNP35Q16560 246 aaKnown RBP1.99□□□□□ -2.09
LSM6-205ENST00000507449 ABCA11PQ4W5N1 156 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 FAM78AQ5JUQ0 283 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 AVPI1Q5T686 147 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 TPTE2P1Q5T6R2 138 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 SAXO2Q658L1 398 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 FAM71E1Q6IPT2 247 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 MRPL55Q7Z7F7 128 aaKnown RBP1.99□□□□□ -2.09
LSM6-205ENST00000507449 CDKL3Q8IVW4 592 aaPredicted RBP1.99□□□□□ -2.09
LSM6-205ENST00000507449 FAM71AQ8IYT1 594 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 JAGN1Q8N5M9 183 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 COMMD1Q8N668 190 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 COX18Q8N8Q8 333 aa1.99□□□□□ -2.09
LSM6-205ENST00000507449 OR51E1Q8TCB6 317 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms