RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 ZNF205O95201 554 aa11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 SERPINA1P01009 418 aa11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 RNASE1P07998 156 aaKnown RBP11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 DBHP09172 617 aa11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 WNT2P09544 360 aa11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 MDH2P40926 338 aaKnown RBP11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 LSM6P62312 80 aaKnown RBP11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 PAX8Q06710 450 aa11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 SRSF4Q08170 494 aaKnown RBP11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 HLXQ14774 488 aaPredicted RBP11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 ESCO2Q56NI9 601 aa11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 HIST2H2BDQ6DRA6 164 aa11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 OR2T2Q6IF00 324 aa11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 TSEN54Q7Z6J9 526 aaKnown RBP11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 ARPINQ7Z6K5 226 aa11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 GLB1L2Q8IW92 636 aa11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 OR1F12Q8NHA8 337 aa11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 RP9Q8TA86 221 aaKnown RBP11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 ZNF420Q8TAQ5 688 aaPredicted RBP11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 FAM46AQ96IP4 442 aaKnown RBP11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 HSH2DQ96JZ2 352 aa11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 ZNF48Q96MX3 618 aaPredicted RBP11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 MRI1Q9BV20 369 aa11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 SYT4Q9H2B2 425 aa11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 NMNAT1Q9HAN9 279 aaPredicted RBP11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 ARGLU1Q9NWB6 273 aaPredicted RBP11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 PTTG3PQ9NZH4 202 aa11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 ASH2LQ9UBL3 628 aa11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 SIGLEC7Q9Y286 467 aa11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 TMEM5Q9Y2B1 443 aa11.24□□□□□ -0.61
POLR2J3-212ENST00000507355 CEACAM18A8MTB9 384 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 H0YL77 283 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 NME4O00746 187 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 SOCS2O14508 198 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 RER1O15258 196 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 NDUFB2O95178 105 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 H2AFXP16104 143 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 SDHAP31040 664 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 CD80P33681 288 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 KRR1Q13601 381 aaKnown RBP11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 GPR139Q6DWJ6 353 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 SLC27A4Q6P1M0 643 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 CYP4Z1Q86W10 505 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 MUC20Q8N307 709 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 OR8G5Q8NG78 346 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 OR5L1Q8NGL2 311 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 OR13G1Q8NGZ3 307 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 SLC7A13Q8TCU3 470 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 NDEL1Q9GZM8 345 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 MS4A7Q9GZW8 240 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 NUAK2Q9H093 628 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 SLITRK2Q9H156 845 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 ANKRD19PQ9H560 264 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 TMEM165Q9HC07 324 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 NRIP3Q9NQ35 241 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 VSX1Q9NZR4 365 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 IL20RAQ9UHF4 553 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 IER3IP1Q9Y5U9 82 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 ENPP4Q9Y6X5 453 aa11.23□□□□□ -0.61
POLR2J3-212ENST00000507355 IGHV3-64DA0A0J9YX35 117 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 IFNL4K9M1U5 179 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 SLC22A2O15244 555 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 GPANK1O95872 356 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 CYB5R3P00387 301 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 COX4I1P13073 169 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 CDKN2AP42771 156 aaKnown RBP11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 CENPAP49450 140 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 RGS6P49758 472 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 GSK3BP49841 420 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 MMP16P51512 607 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 SLC7A2P52569 658 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 SLC9A3R2Q15599 337 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 KCNMB1Q16558 191 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 DOCK11Q5JSL3 2073 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 FBXW12Q6X9E4 464 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 PTCHD4Q6ZW05 846 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 SPATC1Q76KD6 591 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 JAZF1Q86VZ6 243 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 OR10AD1Q8NGE0 317 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 OR52E2Q8NGJ4 325 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 FAM162AQ96A26 154 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 MEGF10Q96KG7 1140 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 ZNF582Q96NG8 517 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 CCT8L2Q96SF2 557 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 HOPXQ9BPY8 73 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 PDP1Q9P0J1 537 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 OR5V1Q9UGF6 321 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 LRCH1Q9Y2L9 728 aa11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 SOX21Q9Y651 276 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-212ENST00000507355 IGHV3OR16-10A0A075B7F0 116 aa11.21□□□□□ -0.61
POLR2J3-212ENST00000507355 J3QW42 95 aa11.21□□□□□ -0.61
POLR2J3-212ENST00000507355 H1F0P07305 194 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-212ENST00000507355 IGHV4-38-2P0DP08 117 aa11.21□□□□□ -0.61
POLR2J3-212ENST00000507355 RPS2P15880 293 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-212ENST00000507355 NCK1P16333 377 aa11.21□□□□□ -0.61
POLR2J3-212ENST00000507355 OMPP47874 163 aa11.21□□□□□ -0.61
POLR2J3-212ENST00000507355 SRP9P49458 86 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-212ENST00000507355 FXYD6P3P58550 94 aa11.21□□□□□ -0.61
POLR2J3-212ENST00000507355 HIST1H3AP68431 136 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms