RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 OMPP47874 163 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 CENPAP49450 140 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 RGS6P49758 472 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 FXYD6P3P58550 94 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 DGCR6Q14129 220 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 ESCO2Q56NI9 601 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 KLF17Q5JT82 389 aaPredicted RBP9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 OR2T2Q6IF00 324 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 RBMS3Q6XE24 437 aaKnown RBP9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 HACD2Q6Y1H2 254 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 PTCHD4Q6ZW05 846 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 ADCK1Q86TW2 530 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 MUC20Q8N307 709 aaPredicted RBP9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 OR10AD1Q8NGE0 317 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 SGMS2Q8NHU3 365 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 ZNF420Q8TAQ5 688 aaPredicted RBP9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 DUX5Q96PT3 197 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 NUAK2Q9H093 628 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 CCDC134Q9H6E4 229 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 EFCAB1Q9HAE3 211 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 NDUFAF4Q9P032 175 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 OR5V1Q9UGF6 321 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 ATPIF1Q9UII2 106 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 RPS6KA6Q9UK32 745 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 NUP50Q9UKX7 468 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 FAM32AQ9Y421 112 aaKnown RBP9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 IER3IP1Q9Y5U9 82 aa9.7□□□□□ -0.86
HMGCS1-204ENST00000507293 TRBV4-1A0A0J9YWV2 114 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 DNAJC9-AS1A6NH13 148 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 UNC119BA6NIH7 251 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 J3QW42 95 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 CCDC22O60826 627 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 DIRAS1O95057 198 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 PPP1R3DO95685 299 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 CYB5R3P00387 301 aaPredicted RBP9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 CDKN2AP42771 156 aaKnown RBP9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 RPS6KA3P51812 740 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 SEC23BQ15437 767 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 KCNMB1Q16558 191 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 MEP1BQ16820 701 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 TUSC1Q2TAM9 212 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 FBXW12Q6X9E4 464 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 DPY19L2P2Q6ZN68 376 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 DOK3Q7L591 496 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 BCL6BQ8N143 479 aaPredicted RBP9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 FAM86B1Q8N7N1 296 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 OR8G5Q8NG78 346 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 OR5L1Q8NGL2 311 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 APOBEC3DQ96AK3 386 aaPredicted RBP9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 MEGF10Q96KG7 1140 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 TSSK2Q96PF2 358 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 C1QTNF5Q9BXJ0 243 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 GCM1Q9NP62 436 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 ABCD2Q9UBJ2 740 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 AURKCQ9UQB9 309 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 LRCH1Q9Y2L9 728 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 LHFPL6Q9Y693 200 aa9.69□□□□□ -0.86
HMGCS1-204ENST00000507293 IGHV3-64DA0A0J9YX35 117 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 H0YL77 283 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 IFNL4K9M1U5 179 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 DCTN6O00399 190 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 NDUFAB1O14561 156 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 MLNRO43193 412 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 ATP8B1O43520 1251 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 ZNF205O95201 554 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 TXNDC12O95881 172 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 WNT2P09544 360 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 HKR1P10072 659 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 RPS2P15880 293 aaKnown RBP9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 RHCEP18577 417 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 CRABP1P29762 137 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 SRP9P49458 86 aaKnown RBP9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 PRSS12P56730 875 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 PSME3P61289 254 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 HIST1H3AP68431 136 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 HSP90B2PQ58FF3 399 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 HIST2H3PS2Q5TEC6 136 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 SLC27A4Q6P1M0 643 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 PGM2L1Q6PCE3 622 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 DNM1P34Q6PK57 102 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 CORO6Q6QEF8 472 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 SMARCD3Q6STE5 483 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 HIST2H3AQ71DI3 136 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 BHLHE23Q8NDY6 225 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 GJC3Q8NFK1 279 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 OR13G1Q8NGZ3 307 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 OR52J3Q8NH60 311 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 FANK1Q8TC84 345 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 C7orf34Q96L11 122 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 DHRS1Q96LJ7 313 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 C1orf147Q96MC9 270 aaPredicted RBP9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 ZNF48Q96MX3 618 aaPredicted RBP9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 ZNF582Q96NG8 517 aaPredicted RBP9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 ERMAPQ96PL5 475 aaPredicted RBP9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 GPA33Q99795 319 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 COQ7Q99807 217 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 SSBP3Q9BWW4 388 aaPredicted RBP9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 HDHD2Q9H0R4 259 aa9.68□□□□□ -0.86
HMGCS1-204ENST00000507293 WDR76Q9H967 626 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms