RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 CCNOP22674 350 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 MYF6P23409 242 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 OPRL1P41146 370 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 SLC15A1P46059 708 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 UCP2P55851 309 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 KRT80Q6KB66 452 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 ZNF101Q8IZC7 436 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 OR2T27Q8NH04 317 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 THEM6Q8WUY1 208 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 IPCEF1Q8WWN9 437 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-210ENST00000506767 LGALS12Q96DT0 336 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 RNFT2Q96EX2 444 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 C4orf45Q96LM5 186 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 KCNJ15Q99712 375 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 ZNF442Q9H7R0 627 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 TBCCD1Q9NVR7 557 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 CISD1Q9NZ45 108 aaKnown RBP11.08□□□□□ -0.64
TCOF1-210ENST00000506767 LAMP5Q9UJQ1 280 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 RPL36Q9Y3U8 105 aaKnown RBP11.08□□□□□ -0.64
TCOF1-210ENST00000506767 SPEF1Q9Y4P9 236 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 ATP23Q9Y6H3 246 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 TEX15Q9BXT5 2789 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 CADP27708 2225 aa11.08□□□□□ -0.64
TCOF1-210ENST00000506767 PRR32B1ATL7 298 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 PHYHO14832 338 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 SMPD2O60906 423 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 APOL3O95236 402 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 ACSM4P0C7M7 580 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 GLRXP35754 106 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 RAD52P43351 418 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 GRB2P62993 217 aaKnown RBP11.07□□□□□ -0.64
TCOF1-210ENST00000506767 GALK2Q01415 458 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 ROM1Q03395 351 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 RAB40BQ12829 278 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 SNTB2Q13425 540 aaKnown RBP11.07□□□□□ -0.64
TCOF1-210ENST00000506767 ZNF544Q6NX49 715 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 DEGS2Q6QHC5 323 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 COLCA1Q6ZS62 124 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 C1orf174Q8IYL3 243 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 RFLNBQ8N5W9 214 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 ZNF611Q8N823 705 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 TMEM171Q8WVE6 324 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 ASB17Q8WXJ9 295 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 FBXW5Q969U6 566 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 ZNF184Q99676 751 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-210ENST00000506767 DHRS9Q9BPW9 319 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 C1QTNF5Q9BXJ0 243 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 BCL2L14Q9BZR8 327 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 AMBNQ9NP70 447 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 CA10Q9NS85 328 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 CENPMQ9NSP4 180 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 PLCXD1Q9NUJ7 323 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 EIF3KQ9UBQ5 218 aaKnown RBP11.07□□□□□ -0.64
TCOF1-210ENST00000506767 POU2F3Q9UKI9 436 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 PCDHGB1Q9Y5G3 927 aa11.07□□□□□ -0.64
TCOF1-210ENST00000506767 A0A1W2PQL4 384 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-210ENST00000506767 ZNF670-ZNF695F2Z2N8 137 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 F5H5K5 113 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 J3QW42 95 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 GPRIN2O60269 458 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 ABHD16AO95870 558 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 NGFP01138 241 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 IGHA1P01876 353 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 DANCRP0C864 163 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 FAM157BP0CG42 384 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 APOBEC3AP31941 199 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-210ENST00000506767 THBS4P35443 961 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 ATP6V1E1P36543 226 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 RGS6P49758 472 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 TPTEP56180 551 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 CXCR4P61073 352 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 ZNF85Q03923 595 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 EGR3Q06889 387 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 ADIPOQQ15848 244 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 MSMPQ1L6U9 139 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 KLHL22Q53GT1 634 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 ZNF684Q5T5D7 378 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 KCTD18Q6PI47 426 aaPredicted RBP11.06□□□□□ -0.64
TCOF1-210ENST00000506767 ARL9Q6T311 187 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 DRAM2Q6UX65 266 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 RFPL4BQ6ZWI9 263 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 SPATC1Q76KD6 591 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 SSX6Q7RTT6 188 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 NAA40Q86UY6 237 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 ZNF679Q8IYX0 411 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 IGFBPL1Q8WX77 278 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 SPTSSAQ969W0 71 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 OR8B4Q96RC9 309 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 COPS4Q9BT78 406 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 ELOVL3Q9HB03 270 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 SLCO1C1Q9NYB5 712 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 GRIP1Q9Y3R0 1128 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 UNC79Q9P2D8 2635 aa11.06□□□□□ -0.64
TCOF1-210ENST00000506767 DCHS2Q6V1P9 2916 aa11.05□□□□□ -0.64
TCOF1-210ENST00000506767 RTTNQ86VV8 2226 aa11.05□□□□□ -0.64
TCOF1-210ENST00000506767 CRYBG3Q68DQ2 2970 aa11.05□□□□□ -0.64
TCOF1-210ENST00000506767 HRNRQ86YZ3 2850 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-210ENST00000506767 M0R135 149 aa11.05□□□□□ -0.64
TCOF1-210ENST00000506767 DENRO43583 198 aaKnown RBP11.05□□□□□ -0.64
TCOF1-210ENST00000506767 ZNF254O75437 659 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms