RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 C1orf100Q5SVJ3 147 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 PTCRAQ6ISU1 281 aaPredicted RBP10.63□□□□□ -0.71
UBE3D-206ENST00000505226 LINC00346Q8IVM7 164 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 OR2I1PQ8NGU4 316 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 TSLPQ969D9 159 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 ADIPOR1Q96A54 375 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 ZNF587Q96SQ5 575 aaPredicted RBP10.63□□□□□ -0.71
UBE3D-206ENST00000505226 RNF126Q9BV68 326 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 SELENOIQ9C0D9 397 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 LAT2Q9GZY6 243 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 TLNRD1Q9H1K6 362 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 SLCO5A1Q9H2Y9 848 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 ESRP2Q9H6T0 727 aaKnown RBP10.63□□□□□ -0.71
UBE3D-206ENST00000505226 SLC2A8Q9NY64 477 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 VSX1Q9NZR4 365 aaPredicted RBP10.63□□□□□ -0.71
UBE3D-206ENST00000505226 KCNK7Q9Y2U2 307 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 TRAV36DV7A0A075B6V5 113 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 IGKV1D-43A0A0B4J1Z2 117 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 TMEM200CA6NKL6 621 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 FGF16O43320 207 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 CD2P06729 351 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 AKR1C4P17516 323 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 HSD17B7P56937 341 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 ZP2Q05996 745 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 FMODQ06828 376 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 ZNF813Q6ZN06 617 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 NUP54Q7Z3B4 507 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 OR52N5Q8NH56 324 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 ZNF768Q9H5H4 540 aaKnown RBP10.63□□□□□ -0.71
UBE3D-206ENST00000505226 PTGES2Q9H7Z7 377 aa10.63□□□□□ -0.71
UBE3D-206ENST00000505226 H0YIZ8 118 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 P2RY10O00398 339 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 GNB3P16520 340 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 VAMP1P23763 118 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 RPL35P42766 123 aaKnown RBP10.62□□□□□ -0.71
UBE3D-206ENST00000505226 DNASE1L1P49184 302 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 PRKXP51817 358 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 SGCBQ16585 318 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 RNASE10Q5GAN6 216 aaKnown RBP10.62□□□□□ -0.71
UBE3D-206ENST00000505226 OR5T2Q8NGG2 359 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 OR4A4PQ8NGN8 299 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 PAQR8Q8TEZ7 354 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 PIK3IP1Q96FE7 263 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 GAL3ST4Q96RP7 486 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 TMEM231Q9H6L2 316 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 LANCL2Q9NS86 450 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 PRR13Q9NZ81 148 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 KIR2DS5A0A0G2JLQ3 304 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 A0A0G2JNG1 304 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 A0A1B0GW55 424 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 ZNF98A6NK75 572 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 KIR2DS3K7RE56 304 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 SSX5O60225 188 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 STK17BO94768 372 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 NUDT14O95848 222 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 DUX4L2P0CJ85 424 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 DUX4L3P0CJ86 424 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 DUX4L4P0CJ87 422 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 DUX4L5P0CJ88 424 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 DUX4L6P0CJ89 424 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 DUX4L7P0CJ90 424 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 GABRA4P48169 554 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 ARRB1P49407 418 aaPredicted RBP10.62□□□□□ -0.71
UBE3D-206ENST00000505226 QRFPP83859 136 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 BIKQ13323 160 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 KIR2DS5Q14953 304 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 ARMC6Q6NXE6 501 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 OR52N4Q8NGI2 321 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.62□□□□□ -0.71
UBE3D-206ENST00000505226 THRSPQ92748 146 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 TXNIPQ9H3M7 391 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 CYTL1Q9NRR1 136 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 DUX4Q9UBX2 424 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 HHLA2Q9UM44 414 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 R4GMQ9 66 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 TMEM131Q92545 1883 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 DBX1A6NMT0 343 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 B4DGG1 531 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 ZNF208O43345 1280 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 NPIPB7O75200 414 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 ZNF217O75362 1048 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 DXOO77932 396 aaKnown RBP10.62□□□□□ -0.71
UBE3D-206ENST00000505226 CD1CP29017 333 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 PNLIPRP2P54317 469 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 YPEL5P62699 121 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 KCTD18Q6PI47 426 aaPredicted RBP10.62□□□□□ -0.71
UBE3D-206ENST00000505226 MAMDC2Q7Z304 686 aaPredicted RBP10.62□□□□□ -0.71
UBE3D-206ENST00000505226 DCXRQ7Z4W1 244 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 ST7LQ8TDW4 575 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 ZNF775Q96BV0 537 aaPredicted RBP10.62□□□□□ -0.71
UBE3D-206ENST00000505226 PRRT1Q99946 306 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 ZNF107Q9UII5 783 aaPredicted RBP10.62□□□□□ -0.71
UBE3D-206ENST00000505226 OR52A1Q9UKL2 312 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 CSAG2Q9Y5P2 127 aa10.62□□□□□ -0.71
UBE3D-206ENST00000505226 C13orf42A0A1B0GVH6 325 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 RAB19A4D1S5 217 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 F8VVB4 439 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 F8VWA3 439 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 PLPP3O14495 311 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 CD79AP11912 226 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms