RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 NPIPB13A6NJU9 1138 aa13.02□□□□□ -0.33
PDLIM7-210ENST00000503827 TRPC5OSA6NMA1 111 aa13.02□□□□□ -0.33
PDLIM7-210ENST00000503827 NPIPB4C9JG80 1138 aa13.02□□□□□ -0.33
PDLIM7-210ENST00000503827 EMX1Q04741 257 aaPredicted RBP13.02□□□□□ -0.33
PDLIM7-210ENST00000503827 SCRN3Q0VDG4 424 aa13.02□□□□□ -0.33
PDLIM7-210ENST00000503827 STX3Q13277 289 aa13.02□□□□□ -0.33
PDLIM7-210ENST00000503827 DEFB121Q5J5C9 76 aa13.02□□□□□ -0.33
PDLIM7-210ENST00000503827 SLC2A7Q6PXP3 512 aa13.02□□□□□ -0.33
PDLIM7-210ENST00000503827 C1orf122Q6ZSJ8 110 aa13.02□□□□□ -0.33
PDLIM7-210ENST00000503827 FOXL2NBQ6ZUU3 175 aa13.02□□□□□ -0.33
PDLIM7-210ENST00000503827 IGFN1Q86VF2 1251 aa13.02□□□□□ -0.33
PDLIM7-210ENST00000503827 KLHDC1Q8N7A1 406 aa13.02□□□□□ -0.33
PDLIM7-210ENST00000503827 OR5L1Q8NGL2 311 aa13.02□□□□□ -0.33
PDLIM7-210ENST00000503827 ERGIC1Q969X5 290 aa13.02□□□□□ -0.33
PDLIM7-210ENST00000503827 ALG12Q9BV10 488 aa13.02□□□□□ -0.33
PDLIM7-210ENST00000503827 PCDHAC1Q9H158 963 aa13.02□□□□□ -0.33
PDLIM7-210ENST00000503827 SEMA6AQ9H2E6 1030 aa13.02□□□□□ -0.33
PDLIM7-210ENST00000503827 TXNIPQ9H3M7 391 aa13.02□□□□□ -0.33
PDLIM7-210ENST00000503827 MEPEQ9NQ76 525 aaPredicted RBP13.02□□□□□ -0.33
PDLIM7-210ENST00000503827 PTTG3PQ9NZH4 202 aa13.02□□□□□ -0.33
PDLIM7-210ENST00000503827 K7EIL1 84 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 ADAM20O43506 726 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 SGCEO43556 437 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 OR7A10O76100 309 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 MT-ND1P03886 318 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 HOXB9P17482 250 aaPredicted RBP13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 PPIBP23284 216 aaKnown RBP13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 KIR2DS4P43632 304 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 GATA4P43694 442 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 IFFO1Q0D2I5 559 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 NPTX1Q15818 432 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 NSUN5P1Q3KNT7 163 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 FBXW12Q6X9E4 464 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 VMO1Q7Z5L0 202 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 LYG1Q8N1E2 194 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 C10orf111Q8N326 155 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 PCYOX1LQ8NBM8 494 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 OR9I1Q8NGQ6 314 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 OR2T6Q8NHC8 308 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 MOSPD2Q8NHP6 518 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 Q8TCH9 128 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 RASD2Q96D21 266 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 TMEM38AQ9H6F2 299 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 SDR39U1Q9NRG7 319 aaPredicted RBP13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 TMEM100Q9NV29 134 aa13.01□□□□□ -0.33
PDLIM7-210ENST00000503827 A0A1B0GVI7 797 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 J3QW42 95 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 HDAC3O15379 428 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 ECDO95905 644 aaPredicted RBP13□□□□□ -0.33
PDLIM7-210ENST00000503827 BGNP21810 368 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 EEF1B2P24534 225 aaKnown RBP13□□□□□ -0.33
PDLIM7-210ENST00000503827 FPR3P25089 353 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 RGS6P49758 472 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 TOP3AQ13472 1001 aaPredicted RBP13□□□□□ -0.33
PDLIM7-210ENST00000503827 DUSP7Q16829 419 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 CDONQ4KMG0 1287 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 BTN2A1Q7KYR7 527 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 CELF2-AS1Q8N7Q2 184 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 BHLHE23Q8NDY6 225 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 OR4F17Q8NGA8 305 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 OR4C13Q8NGP0 309 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 R3HDM4Q96D70 268 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 OR4F4Q96R69 305 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 OCSTAMPQ9BR26 566 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 MMP28Q9H239 520 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 CNTD2Q9H8S5 307 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 SMURF1Q9HCE7 757 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 POLE4Q9NR33 117 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 SLC25A37Q9NYZ2 338 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 KPTNQ9Y664 436 aa13□□□□□ -0.33
PDLIM7-210ENST00000503827 IQCF6A8MYZ5 107 aa12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 NDUFA2O43678 99 aa12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 FAM20BO75063 409 aa12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 PAHP00439 452 aa12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 HLA-DPB1P04440 258 aa12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 VSIG10L2P0DP72 767 aa12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 GUCA2AQ02747 115 aa12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 CD69Q07108 199 aa12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 LAPTM4AQ15012 233 aa12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 C11orf91Q3C1V1 193 aa12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 CLEC12AQ5QGZ9 265 aa12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 INTS11Q5TA45 600 aaKnown RBP12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 SFRP4Q6FHJ7 346 aaPredicted RBP12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 METAP1DQ6UB28 335 aaPredicted RBP12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 RBM45Q8IUH3 476 aaKnown RBP12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 SLC7A6Q92536 515 aa12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 SGTBQ96EQ0 304 aa12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 ZNF583Q96ND8 569 aa12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 PRSS27Q9BQR3 290 aa12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 ROPN1BQ9BZX4 212 aaPredicted RBP12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 ROPN1Q9HAT0 212 aaPredicted RBP12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 EMC7Q9NPA0 242 aa12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 TRIM36Q9NQ86 728 aa12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 DNAH3Q8TD57 4116 aa12.99□□□□□ -0.33
PDLIM7-210ENST00000503827 LGALS8O00214 317 aa12.98□□□□□ -0.33
PDLIM7-210ENST00000503827 OR10H3O60404 316 aa12.98□□□□□ -0.33
PDLIM7-210ENST00000503827 OPN1SWP03999 348 aa12.98□□□□□ -0.33
PDLIM7-210ENST00000503827 SCG5P05408 212 aa12.98□□□□□ -0.33
PDLIM7-210ENST00000503827 TSPAN19P0C672 248 aa12.98□□□□□ -0.33
PDLIM7-210ENST00000503827 CD247P20963 164 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms