RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 RASD2Q96D21 266 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 NMD3Q96D46 503 aaKnown RBP13.38□□□□□ -0.27
DDR1-250ENST00000503628 NRBF2Q96F24 287 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 ERMAPQ96PL5 475 aaPredicted RBP13.38□□□□□ -0.27
DDR1-250ENST00000503628 IFT27Q9BW83 186 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 ZMAT3Q9HA38 289 aaKnown RBP13.38□□□□□ -0.27
DDR1-250ENST00000503628 SMURF2Q9HAU4 748 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 NKIRAS2Q9NYR9 191 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 IL20Q9NYY1 176 aa13.38□□□□□ -0.27
DDR1-250ENST00000503628 WNK1Q9H4A3 2382 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 IMPA2O14732 288 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 ARPC3O15145 178 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 TPD52L2O43399 206 aaKnown RBP13.37□□□□□ -0.27
DDR1-250ENST00000503628 AHCYL1O43865 530 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 SLC2A10O95528 541 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 SERPINA5P05154 406 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 RNASE1P07998 156 aaKnown RBP13.37□□□□□ -0.27
DDR1-250ENST00000503628 FAM157BP0CG42 384 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 MDKP21741 143 aaPredicted RBP13.37□□□□□ -0.27
DDR1-250ENST00000503628 PRKACGP22612 351 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 ZNF84P51523 738 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 KLF3P57682 345 aaPredicted RBP13.37□□□□□ -0.27
DDR1-250ENST00000503628 FMODQ06828 376 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 HFEQ30201 348 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 THEM4Q5T1C6 240 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 AMIGO2Q86SJ2 522 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 OR5K1Q8NHB7 308 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 FGFBP3Q8TAT2 258 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 SYNPRQ8TBG9 265 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 SNX33Q8WV41 574 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 GTF3AQ92664 365 aaKnown RBP13.37□□□□□ -0.27
DDR1-250ENST00000503628 TIMD4Q96H15 378 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 ZNF48Q96MX3 618 aaPredicted RBP13.37□□□□□ -0.27
DDR1-250ENST00000503628 RBP7Q96R05 134 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 GAL3ST1Q99999 423 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 OR51B6Q9H340 312 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 ZNF556Q9HAH1 456 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 DECR2Q9NUI1 292 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 TMEM38BQ9NVV0 291 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 NUP50Q9UKX7 468 aa13.37□□□□□ -0.27
DDR1-250ENST00000503628 IGLV3-9A0A075B6K5 115 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 IGKV1D-43A0A0B4J1Z2 117 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 SLC22A23A1A5C7 686 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 PRSS37A4D1T9 235 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 H7C1C5 153 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 SOCS2O14508 198 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 IDH3BO43837 385 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 ENTPD5O75356 428 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 UBL3O95164 117 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 SOX14O95416 240 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 ANXA8P13928 327 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 ZNF250P15622 560 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 NOS3P29474 1203 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 ERVS71-1P61550 626 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 LCN6P62502 163 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 TSTQ16762 297 aaKnown RBP13.36□□□□□ -0.27
DDR1-250ENST00000503628 ARMCX4Q5H9R4 360 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 KLF17Q5JT82 389 aaPredicted RBP13.36□□□□□ -0.27
DDR1-250ENST00000503628 CLEC12AQ5QGZ9 265 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 HIST2H2BDQ6DRA6 164 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 LEG1Q6P5S2 330 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 SLC25A47Q6Q0C1 308 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 ADCK1Q86TW2 530 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 SKA3Q8IX90 412 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 PAQR4Q8N4S7 273 aaPredicted RBP13.36□□□□□ -0.27
DDR1-250ENST00000503628 OR8D4Q8NGM9 314 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 SLC25A28Q96A46 364 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 TBC1D23Q9NUY8 699 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 SLCO1C1Q9NYB5 712 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 PLEK2Q9NYT0 353 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 FBXL3Q9UKT7 428 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 ZNF281Q9Y2X9 895 aa13.36□□□□□ -0.27
DDR1-250ENST00000503628 H3BNX3 289 aa13.35□□□□□ -0.27
DDR1-250ENST00000503628 BHLHE40O14503 412 aa13.35□□□□□ -0.27
DDR1-250ENST00000503628 CCL2P13500 99 aa13.35□□□□□ -0.27
DDR1-250ENST00000503628 CDKN2AP42771 156 aaKnown RBP13.35□□□□□ -0.27
DDR1-250ENST00000503628 SRSF4Q08170 494 aaKnown RBP13.35□□□□□ -0.27
DDR1-250ENST00000503628 NRN1LQ496H8 165 aa13.35□□□□□ -0.27
DDR1-250ENST00000503628 PTCHD4Q6ZW05 846 aa13.35□□□□□ -0.27
DDR1-250ENST00000503628 SLC22A24Q8N4F4 322 aa13.35□□□□□ -0.27
DDR1-250ENST00000503628 ATG16L2Q8NAA4 619 aa13.35□□□□□ -0.27
DDR1-250ENST00000503628 DEFB108BQ8NET1 73 aa13.35□□□□□ -0.27
DDR1-250ENST00000503628 NSMAFQ92636 917 aa13.35□□□□□ -0.27
DDR1-250ENST00000503628 CENPNQ96H22 339 aaPredicted RBP13.35□□□□□ -0.27
DDR1-250ENST00000503628 TSSK6Q9BXA6 273 aa13.35□□□□□ -0.27
DDR1-250ENST00000503628 SAP30LQ9HAJ7 183 aa13.35□□□□□ -0.27
DDR1-250ENST00000503628 MMP26Q9NRE1 261 aa13.35□□□□□ -0.27
DDR1-250ENST00000503628 UBAP1Q9NZ09 502 aa13.35□□□□□ -0.27
DDR1-250ENST00000503628 VSX1Q9NZR4 365 aaPredicted RBP13.35□□□□□ -0.27
DDR1-250ENST00000503628 KIF17Q9P2E2 1029 aa13.35□□□□□ -0.27
DDR1-250ENST00000503628 UGT2A1Q9Y4X1 527 aa13.35□□□□□ -0.27
DDR1-250ENST00000503628 PPIAL4EA0A075B759 164 aa13.34□□□□□ -0.27
DDR1-250ENST00000503628 PPIAL4CA0A0B4J2A2 164 aa13.34□□□□□ -0.27
DDR1-250ENST00000503628 ISPDA4D126 451 aa13.34□□□□□ -0.27
DDR1-250ENST00000503628 PPIAL4DF5H284 164 aa13.34□□□□□ -0.27
DDR1-250ENST00000503628 G3V2T6 193 aa13.34□□□□□ -0.27
DDR1-250ENST00000503628 LCKP06239 509 aa13.34□□□□□ -0.27
DDR1-250ENST00000503628 OR8G3PP0DMU2 310 aa13.34□□□□□ -0.27
DDR1-250ENST00000503628 PPIAL4FP0DN26 164 aa13.34□□□□□ -0.27
DDR1-250ENST00000503628 HIST1H1CP16403 213 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms