RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 RGS7BPQ6MZT1 257 aaPredicted RBP21.59■■□□□ 1.05
LSM6-202ENST00000502781 TMEM154Q6P9G4 183 aa21.59■■□□□ 1.05
LSM6-202ENST00000502781 UNQ6126/PRO20091Q6UXV3 157 aa21.59■■□□□ 1.05
LSM6-202ENST00000502781 MEPCEQ7L2J0 689 aaKnown RBP21.59■■□□□ 1.05
LSM6-202ENST00000502781 IPCEF1Q8WWN9 437 aaPredicted RBP21.59■■□□□ 1.05
LSM6-202ENST00000502781 DOK1Q99704 481 aa21.59■■□□□ 1.05
LSM6-202ENST00000502781 OR51B6Q9H340 312 aa21.59■■□□□ 1.05
LSM6-202ENST00000502781 ELOVL3Q9HB03 270 aa21.59■■□□□ 1.05
LSM6-202ENST00000502781 ARFGEF3Q5TH69 2177 aa21.59■■□□□ 1.05
LSM6-202ENST00000502781 IGLV3-9A0A075B6K5 115 aa21.58■■□□□ 1.04
LSM6-202ENST00000502781 H7C417 338 aa21.58■■□□□ 1.04
LSM6-202ENST00000502781 J3QW42 95 aa21.58■■□□□ 1.04
LSM6-202ENST00000502781 SELENOFO60613 162 aa21.58■■□□□ 1.04
LSM6-202ENST00000502781 CDKN1AP38936 164 aa21.58■■□□□ 1.04
LSM6-202ENST00000502781 PTH2RP49190 550 aa21.58■■□□□ 1.04
LSM6-202ENST00000502781 ART1P52961 327 aa21.58■■□□□ 1.04
LSM6-202ENST00000502781 LRRC36Q1X8D7 754 aa21.58■■□□□ 1.04
LSM6-202ENST00000502781 LCN1P1Q5VSP4 162 aa21.58■■□□□ 1.04
LSM6-202ENST00000502781 ARL9Q6T311 187 aa21.58■■□□□ 1.04
LSM6-202ENST00000502781 GID4Q8IVV7 300 aa21.58■■□□□ 1.04
LSM6-202ENST00000502781 OR1J1Q8NGS3 322 aa21.58■■□□□ 1.04
LSM6-202ENST00000502781 OTOSQ8NHW6 89 aa21.58■■□□□ 1.04
LSM6-202ENST00000502781 FAM81AQ8TBF8 368 aa21.58■■□□□ 1.04
LSM6-202ENST00000502781 CACNG6Q9BXT2 260 aa21.58■■□□□ 1.04
LSM6-202ENST00000502781 SMPD3Q9NY59 655 aaPredicted RBP21.58■■□□□ 1.04
LSM6-202ENST00000502781 HAO2Q9NYQ3 351 aa21.58■■□□□ 1.04
LSM6-202ENST00000502781 NKX1-2Q9UD57 310 aaPredicted RBP21.58■■□□□ 1.04
LSM6-202ENST00000502781 SLC22A31A6NKX4 558 aa21.57■■□□□ 1.04
LSM6-202ENST00000502781 SLC16A6O15403 523 aa21.57■■□□□ 1.04
LSM6-202ENST00000502781 ABHD16AO95870 558 aa21.57■■□□□ 1.04
LSM6-202ENST00000502781 LCKP06239 509 aa21.57■■□□□ 1.04
LSM6-202ENST00000502781 SLC25A30Q5SVS4 291 aa21.57■■□□□ 1.04
LSM6-202ENST00000502781 COLCA1Q6ZS62 124 aa21.57■■□□□ 1.04
LSM6-202ENST00000502781 RHOUQ7L0Q8 258 aa21.57■■□□□ 1.04
LSM6-202ENST00000502781 ABHD4Q8TB40 342 aa21.57■■□□□ 1.04
LSM6-202ENST00000502781 RNF133Q8WVZ7 376 aa21.57■■□□□ 1.04
LSM6-202ENST00000502781 UBE2FQ969M7 185 aa21.57■■□□□ 1.04
LSM6-202ENST00000502781 SLAMF6Q96DU3 332 aa21.57■■□□□ 1.04
LSM6-202ENST00000502781 MARS2Q96GW9 593 aaKnown RBP21.57■■□□□ 1.04
LSM6-202ENST00000502781 ABHD6Q9BV23 337 aa21.57■■□□□ 1.04
LSM6-202ENST00000502781 FAM118AQ9NWS6 357 aa21.57■■□□□ 1.04
LSM6-202ENST00000502781 H2AFY2Q9P0M6 372 aaPredicted RBP21.57■■□□□ 1.04
LSM6-202ENST00000502781 GRIP1Q9Y3R0 1128 aa21.57■■□□□ 1.04
LSM6-202ENST00000502781 OTOGQ6ZRI0 2925 aa21.56■■□□□ 1.04
LSM6-202ENST00000502781 BMP4P12644 408 aa21.56■■□□□ 1.04
LSM6-202ENST00000502781 TUBG1P23258 451 aa21.56■■□□□ 1.04
LSM6-202ENST00000502781 RGS6P49758 472 aa21.56■■□□□ 1.04
LSM6-202ENST00000502781 PPP1CBP62140 327 aa21.56■■□□□ 1.04
LSM6-202ENST00000502781 SNRPGP62308 76 aaKnown RBP21.56■■□□□ 1.04
LSM6-202ENST00000502781 EIF2B1Q14232 305 aaKnown RBP21.56■■□□□ 1.04
LSM6-202ENST00000502781 LRP11Q86VZ4 500 aa21.56■■□□□ 1.04
LSM6-202ENST00000502781 GALNT4Q8N4A0 578 aa21.56■■□□□ 1.04
LSM6-202ENST00000502781 ZNF454Q8N9F8 522 aa21.56■■□□□ 1.04
LSM6-202ENST00000502781 RNPEPL1Q9HAU8 725 aa21.56■■□□□ 1.04
LSM6-202ENST00000502781 TUBG2Q9NRH3 451 aa21.56■■□□□ 1.04
LSM6-202ENST00000502781 FBXO9Q9UK97 447 aaPredicted RBP21.56■■□□□ 1.04
LSM6-202ENST00000502781 ITGB1BP2Q9UKP3 347 aa21.56■■□□□ 1.04
LSM6-202ENST00000502781 LOC100130705A0A1B0GUX0 176 aa21.55■■□□□ 1.04
LSM6-202ENST00000502781 H3BSA7 217 aa21.55■■□□□ 1.04
LSM6-202ENST00000502781 ACSM4P0C7M7 580 aa21.55■■□□□ 1.04
LSM6-202ENST00000502781 NAA10P41227 235 aaPredicted RBP21.55■■□□□ 1.04
LSM6-202ENST00000502781 SNRPD2P62316 118 aaKnown RBP21.55■■□□□ 1.04
LSM6-202ENST00000502781 SLC16A9Q7RTY1 509 aa21.55■■□□□ 1.04
LSM6-202ENST00000502781 KRTAP1-3Q8IUG1 177 aa21.55■■□□□ 1.04
LSM6-202ENST00000502781 TRMT61AQ96FX7 289 aaKnown RBP21.55■■□□□ 1.04
LSM6-202ENST00000502781 ZNF582Q96NG8 517 aaPredicted RBP21.55■■□□□ 1.04
LSM6-202ENST00000502781 AMELYQ99218 206 aa21.55■■□□□ 1.04
LSM6-202ENST00000502781 YIPF3Q9GZM5 350 aa21.55■■□□□ 1.04
LSM6-202ENST00000502781 IMPAD1Q9NX62 359 aa21.55■■□□□ 1.04
LSM6-202ENST00000502781 MYEF2Q9P2K5 600 aaKnown RBP21.55■■□□□ 1.04
LSM6-202ENST00000502781 GMPPBQ9Y5P6 360 aa21.55■■□□□ 1.04
LSM6-202ENST00000502781 PMF1-BGLAPU3KQ54 211 aa21.55■■□□□ 1.04
LSM6-202ENST00000502781 ZNF878C9JN71 531 aa21.54■■□□□ 1.04
LSM6-202ENST00000502781 ALOX5APP20292 161 aa21.54■■□□□ 1.04
LSM6-202ENST00000502781 PPOXP50336 477 aa21.54■■□□□ 1.04
LSM6-202ENST00000502781 NUDT6P53370 316 aa21.54■■□□□ 1.04
LSM6-202ENST00000502781 SLC34A1Q06495 639 aa21.54■■□□□ 1.04
LSM6-202ENST00000502781 MBNL2Q5VZF2 373 aaKnown RBP21.54■■□□□ 1.04
LSM6-202ENST00000502781 SYNPRQ8TBG9 265 aa21.54■■□□□ 1.04
LSM6-202ENST00000502781 SLC25A40Q8TBP6 338 aa21.54■■□□□ 1.04
LSM6-202ENST00000502781 PERPQ96FX8 193 aa21.54■■□□□ 1.04
LSM6-202ENST00000502781 SYT3Q9BQG1 590 aa21.54■■□□□ 1.04
LSM6-202ENST00000502781 C1QTNF5Q9BXJ0 243 aa21.54■■□□□ 1.04
LSM6-202ENST00000502781 OR2J1Q9GZK6 312 aa21.54■■□□□ 1.04
LSM6-202ENST00000502781 FZR1Q9UM11 496 aa21.54■■□□□ 1.04
LSM6-202ENST00000502781 STARD10Q9Y365 291 aa21.54■■□□□ 1.04
LSM6-202ENST00000502781 AKAP9Q99996 3911 aa21.54■■□□□ 1.04
LSM6-202ENST00000502781 F5H5K5 113 aa21.53■■□□□ 1.04
LSM6-202ENST00000502781 CLPTM1O96005 669 aa21.53■■□□□ 1.04
LSM6-202ENST00000502781 LYNP07948 512 aa21.53■■□□□ 1.04
LSM6-202ENST00000502781 GABRB1P18505 474 aa21.53■■□□□ 1.04
LSM6-202ENST00000502781 HTR1FP30939 366 aa21.53■■□□□ 1.04
LSM6-202ENST00000502781 OCLNQ16625 522 aa21.53■■□□□ 1.04
LSM6-202ENST00000502781 ZNF718Q3SXZ3 478 aa21.53■■□□□ 1.04
LSM6-202ENST00000502781 KLF14Q8TD94 323 aaPredicted RBP21.53■■□□□ 1.04
LSM6-202ENST00000502781 APOBEC3DQ96AK3 386 aaPredicted RBP21.53■■□□□ 1.04
LSM6-202ENST00000502781 COG8Q96MW5 612 aa21.53■■□□□ 1.04
LSM6-202ENST00000502781 WARS2Q9UGM6 360 aaKnown RBP21.53■■□□□ 1.04
LSM6-202ENST00000502781 DUSP13Q9UII6 198 aa21.53■■□□□ 1.04
LSM6-202ENST00000502781 KLHDC2Q9Y2U9 406 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms