RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 IGFN1Q86VF2 1251 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 BOLLQ8N9W6 283 aaKnown RBP9.66□□□□□ -0.86
CDK9-205ENST00000498339 OR8G5Q8NG78 346 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 OR4D11Q8NGI4 311 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 FNDC8Q8TC99 324 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 TMEM255BQ8WV15 326 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 SLC7A6Q92536 515 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 SPDL1Q96EA4 605 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 MAELQ96JY0 434 aaKnown RBP9.66□□□□□ -0.86
CDK9-205ENST00000498339 ZNF426Q9BUY5 554 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 TOR3AQ9H497 397 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 IKZF5Q9H5V7 419 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 SSU72Q9NP77 194 aaKnown RBP9.66□□□□□ -0.86
CDK9-205ENST00000498339 C20orf141Q9NUB4 165 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 NECAP2Q9NVZ3 263 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 CCDC167Q9P0B6 97 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 VPREB3Q9UKI3 123 aa9.66□□□□□ -0.86
CDK9-205ENST00000498339 H7C1C5 153 aa9.65□□□□□ -0.86
CDK9-205ENST00000498339 M0QX08 132 aa9.65□□□□□ -0.86
CDK9-205ENST00000498339 MLNRO43193 412 aa9.65□□□□□ -0.86
CDK9-205ENST00000498339 HLA-DPB1P04440 258 aa9.65□□□□□ -0.86
CDK9-205ENST00000498339 MMP9P14780 707 aa9.65□□□□□ -0.86
CDK9-205ENST00000498339 FUT4P22083 530 aa9.65□□□□□ -0.86
CDK9-205ENST00000498339 FPR3P25089 353 aa9.65□□□□□ -0.86
CDK9-205ENST00000498339 GABRA5P31644 462 aa9.65□□□□□ -0.86
CDK9-205ENST00000498339 RPL27P61353 136 aaKnown RBP9.65□□□□□ -0.86
CDK9-205ENST00000498339 ARF6P62330 175 aa9.65□□□□□ -0.86
CDK9-205ENST00000498339 LCN6P62502 163 aa9.65□□□□□ -0.86
CDK9-205ENST00000498339 LAPTM4AQ15012 233 aa9.65□□□□□ -0.86
CDK9-205ENST00000498339 KCNJ8Q15842 424 aa9.65□□□□□ -0.86
CDK9-205ENST00000498339 INTS11Q5TA45 600 aaKnown RBP9.65□□□□□ -0.86
CDK9-205ENST00000498339 ZNF841Q6ZN19 808 aa9.65□□□□□ -0.86
CDK9-205ENST00000498339 SYT9Q86SS6 491 aa9.65□□□□□ -0.86
CDK9-205ENST00000498339 TSPYL5Q86VY4 417 aaPredicted RBP9.65□□□□□ -0.86
CDK9-205ENST00000498339 NKAIN4Q8IVV8 208 aa9.65□□□□□ -0.86
CDK9-205ENST00000498339 OR5L1Q8NGL2 311 aa9.65□□□□□ -0.86
CDK9-205ENST00000498339 ZBTB9Q96C00 473 aa9.65□□□□□ -0.86
CDK9-205ENST00000498339 PRSS27Q9BQR3 290 aa9.65□□□□□ -0.86
CDK9-205ENST00000498339 SEMA6AQ9H2E6 1030 aa9.65□□□□□ -0.86
CDK9-205ENST00000498339 POLE4Q9NR33 117 aa9.65□□□□□ -0.86
CDK9-205ENST00000498339 UFSP2Q9NUQ7 469 aa9.65□□□□□ -0.86
CDK9-205ENST00000498339 AURKAIP1Q9NWT8 199 aaPredicted RBP9.65□□□□□ -0.86
CDK9-205ENST00000498339 CAB39Q9Y376 341 aaPredicted RBP9.65□□□□□ -0.86
CDK9-205ENST00000498339 NPIPB13A6NJU9 1138 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 NPIPB4C9JG80 1138 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 ADAM20O43506 726 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 FAM20BO75063 409 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 FBP1P09467 338 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 GPX2P18283 190 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 TGFBR2P37173 567 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 PSMB10P40306 273 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 RBM34P42696 430 aaKnown RBP9.64□□□□□ -0.87
CDK9-205ENST00000498339 RGS6P49758 472 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 CTXN1P60606 82 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 OR8B8Q15620 311 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 OXLD1Q5BKU9 147 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 PAGE3Q5JUK9 113 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 SFRP4Q6FHJ7 346 aaPredicted RBP9.64□□□□□ -0.87
CDK9-205ENST00000498339 FOXL2NBQ6ZUU3 175 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 MAVSQ7Z434 540 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 GALNT4Q8N4A0 578 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 C10orf82Q8WW14 230 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 TMEM239Q8WW34 195 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 RASD2Q96D21 266 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 CPPED1Q9BRF8 314 aaPredicted RBP9.64□□□□□ -0.87
CDK9-205ENST00000498339 SIRPDQ9H106 197 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 PPA2Q9H2U2 334 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 WDR76Q9H967 626 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 TMEM100Q9NV29 134 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 CTSZQ9UBR2 303 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 POLR1DQ9Y2S0 133 aa9.64□□□□□ -0.87
CDK9-205ENST00000498339 A6NIZ1 184 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 FBP2O00757 339 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 SNNO75324 88 aaPredicted RBP9.63□□□□□ -0.87
CDK9-205ENST00000498339 TSPAN9O75954 239 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 FSTL3O95633 263 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 PAHP00439 452 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 SCG5P05408 212 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 DBHP09172 617 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 PMELP40967 661 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 PRSS12P56730 875 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 RAP1BP61224 184 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 VSNL1P62760 191 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 RAP1AP62834 184 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 HOXA4Q00056 320 aaPredicted RBP9.63□□□□□ -0.87
CDK9-205ENST00000498339 AQP6Q13520 282 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 MPP2Q14168 576 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 PRAMEF6Q5VXH4 476 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 OTPQ5XKR4 325 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 FBXW12Q6X9E4 464 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 VMO1Q7Z5L0 202 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 MICU2Q8IYU8 434 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 ITPKCQ96DU7 683 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 WACQ9BTA9 647 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 HCAR1Q9BXC0 346 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 PCDHAC1Q9H158 963 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 RERGLQ9H628 205 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 SMURF1Q9HCE7 757 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 ZNRD1Q9P1U0 126 aa9.63□□□□□ -0.87
CDK9-205ENST00000498339 ONECUT1Q9UBC0 465 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms