RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 TRAV20A0A0B4J274 112 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 ISPDA4D126 451 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 B2RBV5 119 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 TNFRSF11BO00300 401 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 IDH3BO43837 385 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 KRT36O76013 467 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 PNPP00491 289 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 IGHV2-5P01817 119 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 DBHP09172 617 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 TNFRSF1AP19438 455 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 ATP6V1B2P21281 511 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 HMGA2P52926 109 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 HIST1H3AP68431 136 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 SRSF2Q01130 221 aaKnown RBP7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 COX10Q12887 443 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 CDK5R2Q13319 367 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 SLC36A3Q495N2 470 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 HIST2H3PS2Q5TEC6 136 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 LIPNQ5VXI9 398 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 RPL13AP3Q6NVV1 102 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 SHQ1Q6PI26 577 aaKnown RBP7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 CORO6Q6QEF8 472 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 LIAT1Q6ZQX7 453 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 Q6ZR03 302 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 HIST2H3AQ71DI3 136 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 PEG10Q86TG7 708 aaKnown RBP7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 ZBTB46Q86UZ6 589 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 ARHGAP24Q8N264 748 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 LINC00471Q8N535 108 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 RFLNBQ8N5W9 214 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 FITM2Q8N6M3 262 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 SDR9C7Q8NEX9 313 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 SLC26A10Q8NG04 563 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 OR2Z1Q8NG97 314 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 OR9Q2Q8NGE9 314 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 OR52L1Q8NGH7 329 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 OR52E2Q8NGJ4 325 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 OR5L1Q8NGL2 311 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 PTP4A1Q93096 173 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 HAVCR1Q96D42 359 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 CMBLQ96DG6 245 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 NSL1Q96IY1 281 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 CCT8L2Q96SF2 557 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 COQ7Q99807 217 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 GAL3ST1Q99999 423 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 REPIN1Q9BWE0 567 aaKnown RBP7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 MUC13Q9H3R2 512 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 FN3KQ9H479 309 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 EGLN3Q9H6Z9 239 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 PTTG3PQ9NZH4 202 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 LYVE1Q9Y5Y7 322 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 DOCK11Q5JSL3 2073 aa7.18□□□□□ -1.26
HMGXB4-207ENST00000498212 TCRBV5S2A0A599 114 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 OR6C68A6NDL8 312 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 SURF4O15260 269 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 TCF21O43680 179 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 PLPP2O43688 288 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 DEAF1O75398 565 aaPredicted RBP7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 CCNB2O95067 398 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 FAM107AO95990 144 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 HLA-DQA2P01906 255 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 RAC2P15153 192 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 MAGEA2P43356 314 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 ERFP50548 548 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 DBPQ10586 325 aaPredicted RBP7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 HLXQ14774 488 aaPredicted RBP7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 SPRNQ5BIV9 151 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 CLEC12AQ5QGZ9 265 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 SLC35F1Q5T1Q4 408 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 LCE2AQ5TA79 106 aaPredicted RBP7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 SLC18B1Q6NT16 456 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 FAHD2BQ6P2I3 314 aaPredicted RBP7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 FBXW12Q6X9E4 464 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 CFAP77Q6ZQR2 320 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 ZNF771Q7L3S4 317 aaPredicted RBP7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 DHFR2Q86XF0 187 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 LINC00346Q8IVM7 164 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 OR5AS1Q8N127 324 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 OR2AJ1Q8NGZ0 328 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 APOBEC3DQ96AK3 386 aaPredicted RBP7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 FAHD2AQ96GK7 314 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 ATF6BQ99941 703 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 BTBD10Q9BSF8 475 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 CDADC1Q9BWV3 514 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 TRIM15Q9C019 465 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 MAGIXQ9H6Y5 334 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 METTL17Q9H7H0 456 aaPredicted RBP7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 G6PC2Q9NQR9 355 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 TMEM106BQ9NUM4 274 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 IL19Q9UHD0 177 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 NPTNQ9Y639 398 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 CDH10Q9Y6N8 788 aa7.17□□□□□ -1.26
HMGXB4-207ENST00000498212 A0A0G2JMP0 313 aa7.16□□□□□ -1.26
HMGXB4-207ENST00000498212 A0A0X1KG70 313 aa7.16□□□□□ -1.26
HMGXB4-207ENST00000498212 BHLHE40O14503 412 aa7.16□□□□□ -1.26
HMGXB4-207ENST00000498212 ST8SIA5O15466 376 aa7.16□□□□□ -1.26
HMGXB4-207ENST00000498212 GASTP01350 101 aa7.16□□□□□ -1.26
HMGXB4-207ENST00000498212 IGHV2-70P01814 119 aa7.16□□□□□ -1.26
HMGXB4-207ENST00000498212 CALB2P22676 271 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms