RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 NDUFAF4Q9P032 175 aa9.93□□□□□ -0.82
NUDCD3-211ENST00000497978 ABCD2Q9UBJ2 740 aa9.93□□□□□ -0.82
NUDCD3-211ENST00000497978 EGFL7Q9UHF1 273 aa9.93□□□□□ -0.82
NUDCD3-211ENST00000497978 IL20RAQ9UHF4 553 aa9.93□□□□□ -0.82
NUDCD3-211ENST00000497978 ATPIF1Q9UII2 106 aa9.93□□□□□ -0.82
NUDCD3-211ENST00000497978 PPP1R3CQ9UQK1 317 aa9.93□□□□□ -0.82
NUDCD3-211ENST00000497978 DYSFO75923 2080 aa9.93□□□□□ -0.82
NUDCD3-211ENST00000497978 OR6C6A6NF89 314 aa9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 IFNL4K9M1U5 179 aa9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 BTG1P62324 171 aa9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 KCNMB1Q16558 191 aa9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 CCDC92Q53HC0 331 aaPredicted RBP9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 SMARCD3Q6STE5 483 aa9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 RBMS3Q6XE24 437 aaKnown RBP9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 Q6ZR03 302 aa9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 TSEN54Q7Z6J9 526 aaKnown RBP9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 LRRC28Q86X40 367 aaPredicted RBP9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 MUC20Q8N307 709 aaPredicted RBP9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 C3orf56Q8N813 242 aa9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 ATG16L2Q8NAA4 619 aa9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 GJC3Q8NFK1 279 aa9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 ITLN1Q8WWA0 313 aa9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 SLC7A6Q92536 515 aa9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 POP5Q969H6 163 aaKnown RBP9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 APOBEC3DQ96AK3 386 aaPredicted RBP9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 OR2V2Q96R30 315 aa9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 NUAK2Q9H093 628 aa9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 NTN4Q9HB63 628 aa9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 PATZ1Q9HBE1 687 aaKnown RBP9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 DCAF13Q9NV06 445 aaKnown RBP9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 DCAF16Q9NXF7 216 aa9.92□□□□□ -0.82
NUDCD3-211ENST00000497978 TRBV4-1A0A0J9YWV2 114 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 TMEM89A2RUT3 159 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 RER1O15258 196 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 TXNDC12O95881 172 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 RENP00797 406 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 ZFP36P26651 326 aaKnown RBP9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 PRDX6P30041 224 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 MDH2P40926 338 aaKnown RBP9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 CDKN2AP42771 156 aaKnown RBP9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 SRP9P49458 86 aaKnown RBP9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 COMPP49747 757 aaPredicted RBP9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 SEC23BQ15437 767 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 ESCO2Q56NI9 601 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 ARMCX4Q5H9R4 360 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 OTPQ5XKR4 325 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 FBXW12Q6X9E4 464 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 PTCHD4Q6ZW05 846 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 JAZF1Q86VZ6 243 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 OR5AS1Q8N127 324 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 OR13G1Q8NGZ3 307 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 OR52J3Q8NH60 311 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 FANK1Q8TC84 345 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 ZMYND19Q96E35 227 aaPredicted RBP9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 C7orf34Q96L11 122 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 ZNF582Q96NG8 517 aaPredicted RBP9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 ERMAPQ96PL5 475 aaPredicted RBP9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 COQ7Q99807 217 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 ELAC2Q9BQ52 826 aaKnown RBP9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 MRI1Q9BV20 369 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 HDHD2Q9H0R4 259 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 DDX28Q9NUL7 540 aaKnown RBP9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 PTTG3PQ9NZH4 202 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 OPN4Q9UHM6 478 aa9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 POLR3KQ9Y2Y1 108 aaPredicted RBP9.91□□□□□ -0.82
NUDCD3-211ENST00000497978 NBEAL1Q6ZS30 2694 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 TMEM178BH3BS89 294 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 IMPA2O14732 288 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 DIRAS1O95057 198 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 GADD45GO95257 159 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 PPP1R3DO95685 299 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 FSHBP01225 129 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 DBHP09172 617 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 CPT2P23786 658 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 NOS3P29474 1203 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 SLC6A6P31641 620 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 IFNGR2P38484 337 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 SLC6A9P48067 706 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 FXYD6P3P58550 94 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 SPIBQ01892 262 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 ZNF154Q13106 437 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 HLXQ14774 488 aaPredicted RBP9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 ZMYND11Q15326 602 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 SLC36A3Q495N2 470 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 OR2T2Q6IF00 324 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 LEG1Q6P5S2 330 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 OR8G5Q8NG78 346 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 MCUR1Q96AQ8 359 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 DHRS1Q96LJ7 313 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 GPA33Q99795 319 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 CDADC1Q9BWV3 514 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 HCAR1Q9BXC0 346 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 MYLK2Q9H1R3 596 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 GORASP2Q9H8Y8 452 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 SRA1Q9HD15 236 aaKnown RBP9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 GCM1Q9NP62 436 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 OR5V1Q9UGF6 321 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 AUP1Q9Y679 476 aa9.9□□□□□ -0.82
NUDCD3-211ENST00000497978 ARHGAP32A7KAX9 2087 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms