RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 OR52I1Q8NGK6 324 aa10.29□□□□□ -0.76
CUX1-210ENST00000497815 FBLIM1Q8WUP2 373 aa10.29□□□□□ -0.76
CUX1-210ENST00000497815 RNF133Q8WVZ7 376 aa10.29□□□□□ -0.76
CUX1-210ENST00000497815 AKAP1Q92667 903 aaKnown RBP eCLIP10.29□□□□□ -0.761e-6■■■■□ 21.5
CUX1-210ENST00000497815 SPTSSAQ969W0 71 aa10.29□□□□□ -0.76
CUX1-210ENST00000497815 TMEM204Q9BSN7 226 aa10.29□□□□□ -0.76
CUX1-210ENST00000497815 Q9H521 79 aa10.29□□□□□ -0.76
CUX1-210ENST00000497815 UBTD1Q9HAC8 227 aa10.29□□□□□ -0.76
CUX1-210ENST00000497815 SLCO1C1Q9NYB5 712 aa10.29□□□□□ -0.76
CUX1-210ENST00000497815 EIF3KQ9UBQ5 218 aaKnown RBP10.29□□□□□ -0.76
CUX1-210ENST00000497815 IKZF2Q9UKS7 526 aa10.29□□□□□ -0.76
CUX1-210ENST00000497815 MYRFQ9Y2G1 1151 aa10.29□□□□□ -0.76
CUX1-210ENST00000497815 PCDHGB5Q9Y5G0 923 aa10.29□□□□□ -0.76
CUX1-210ENST00000497815 N6AMT1Q9Y5N5 214 aa10.29□□□□□ -0.76
CUX1-210ENST00000497815 DAPL1A0PJW8 107 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 FAM221AA4D161 298 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 GOSR1O95249 250 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 FADS2O95864 444 aaKnown RBP10.28□□□□□ -0.76
CUX1-210ENST00000497815 ABHD16AO95870 558 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 LCKP06239 509 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 OR2T7P0C7T2 308 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 PRF1P14222 555 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 SSTR2P30874 369 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 OPRL1P41146 370 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 SLC15A1P46059 708 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 SLC6A9P48067 706 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 RAB40BQ12829 278 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 RSPO1Q2MKA7 263 aaPredicted RBP10.28□□□□□ -0.76
CUX1-210ENST00000497815 KLHL22Q53GT1 634 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 C6orf141Q5SZD1 244 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 KCTD18Q6PI47 426 aaPredicted RBP10.28□□□□□ -0.76
CUX1-210ENST00000497815 ZNF322Q6U7Q0 402 aaPredicted RBP10.28□□□□□ -0.76
CUX1-210ENST00000497815 ZNF101Q8IZC7 436 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 ZNF283Q8N7M2 679 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 OR2T27Q8NH04 317 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 LILRB1Q8NHL6 650 aaPredicted RBP10.28□□□□□ -0.76
CUX1-210ENST00000497815 ABHD4Q8TB40 342 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 ASB17Q8WXJ9 295 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 C14orf79Q96F83 325 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 C4orf45Q96LM5 186 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 MNTQ99583 582 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 KCNJ15Q99712 375 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 DDX28Q9NUL7 540 aaKnown RBP10.28□□□□□ -0.76
CUX1-210ENST00000497815 EXOGQ9Y2C4 368 aaKnown RBP10.28□□□□□ -0.76
CUX1-210ENST00000497815 SPEF1Q9Y4P9 236 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 USP9YO00507 2555 aaPredicted RBP10.28□□□□□ -0.76
CUX1-210ENST00000497815 DOPEY2Q9Y3R5 2298 aa10.28□□□□□ -0.76
CUX1-210ENST00000497815 ICE1Q9Y2F5 2266 aa10.27□□□□□ -0.76
CUX1-210ENST00000497815 E7EQL1 145 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 M0R135 149 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 PHYHO14832 338 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 GPRIN2O60269 458 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 SMPD2O60906 423 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 NGFP01138 241 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 ACSM4P0C7M7 580 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 SLC2A1P11166 492 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 NR4A1P22736 598 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 THBS4P35443 961 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 CX3CR1P49238 355 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 UCP2P55851 309 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 TPTEP56180 551 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 ERVS71-1P61550 626 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 GRB2P62993 217 aaKnown RBP10.27□□□□□ -0.77
CUX1-210ENST00000497815 ACTC1P68032 377 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 ACTA1P68133 377 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 ZNF85Q03923 595 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 ZNF672Q499Z4 452 aaPredicted RBP10.27□□□□□ -0.77
CUX1-210ENST00000497815 SPATA46Q5T0L3 261 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 ARL9Q6T311 187 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 PLEKHG7Q6ZR37 379 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 RFPL4BQ6ZWI9 263 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 AHSA2Q719I0 299 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 NAA40Q86UY6 237 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 ZNF786Q8N393 782 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 ACBD7Q8N6N7 88 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 OR1J1Q8NGS3 322 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 SNX33Q8WV41 574 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 GGHQ92820 318 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 ZNF799Q96GE5 643 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 OR8B4Q96RC9 309 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 MROQ9BYG7 248 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 ELOVL3Q9HB03 270 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 BRD7Q9NPI1 651 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 CISD1Q9NZ45 108 aaKnown RBP10.27□□□□□ -0.77
CUX1-210ENST00000497815 ATPIF1Q9UII2 106 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 FZR1Q9UM11 496 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 LRP12Q9Y561 859 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 PCDHGB1Q9Y5G3 927 aa10.27□□□□□ -0.77
CUX1-210ENST00000497815 IRGMA1A4Y4 181 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 PTGES3LE9PB15 166 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 J3QRE1 110 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 SLC1A7O00341 560 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 HS3ST1O14792 307 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 DENRO43583 198 aaKnown RBP10.26□□□□□ -0.77
CUX1-210ENST00000497815 RPP14O95059 124 aaKnown RBP10.26□□□□□ -0.77
CUX1-210ENST00000497815 LCATP04180 440 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 KRT8P05787 483 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 ANXA2P07355 339 aaKnown RBP10.26□□□□□ -0.77
CUX1-210ENST00000497815 ADRA2AP08913 450 aa10.26□□□□□ -0.77
CUX1-210ENST00000497815 RAD52P43351 418 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms