RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ZNF823P16415 610 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 CTRB1P17538 263 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 PSMC3P17980 439 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 DTYMKP23919 212 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 HCAR3P49019 387 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 PFN3P60673 137 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 PPP1CBP62140 327 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 SEMG2Q02383 582 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 ART3Q13508 389 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 C16orf72Q14CZ0 275 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 PIP5KL1Q5T9C9 394 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 PLET1Q6UQ28 207 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 ZFP2Q6ZN57 461 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 NCCRP1Q6ZVX7 275 aaPredicted RBP2.52□□□□□ -2.01
SMC4-225ENST00000497203 NPWQ8N729 165 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 CYB561D1Q8N8Q1 229 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 ZFP41Q8N8Y5 198 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 C15orf56Q8N910 161 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 OR5W2Q8NH69 310 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 OR51E1Q8TCB6 317 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 GPX8Q8TED1 209 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 DCPSQ96C86 337 aaKnown RBP2.52□□□□□ -2.01
SMC4-225ENST00000497203 PDXPQ96GD0 296 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 UBE2ZQ9H832 354 aaPredicted RBP2.52□□□□□ -2.01
SMC4-225ENST00000497203 PXMP2Q9NR77 195 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 CHRAC1Q9NRG0 131 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 MYEF2Q9P2K5 600 aaKnown RBP2.52□□□□□ -2.01
SMC4-225ENST00000497203 CAMTA1Q9Y6Y1 1673 aa2.52□□□□□ -2.01
SMC4-225ENST00000497203 UBN2Q6ZU65 1347 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 GOLGA6L7A0A1B0GV03 622 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 TMEM120BA0PK00 339 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 K7EMT4 169 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 L7N2F9 121 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 SLC9A3R1O14745 358 aaPredicted RBP2.51□□□□□ -2.01
SMC4-225ENST00000497203 ENTPD5O75356 428 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 EIF4EP06730 217 aaKnown RBP2.51□□□□□ -2.01
SMC4-225ENST00000497203 POLR2MP0CAP2 368 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 PGAM1P18669 254 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 TCN2P20062 427 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 RAB4AP20338 218 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 IL32P24001 234 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 SSTR5P35346 364 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 RFC3P40938 356 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 SLC1A2P43004 574 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 PRR3P79522 188 aaKnown RBP2.51□□□□□ -2.01
SMC4-225ENST00000497203 DNAJC3Q13217 504 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 KIR2DS1Q14954 304 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 WDR43Q15061 677 aaKnown RBP eCLIP2.51□□□□□ -2.01
SMC4-225ENST00000497203 TFDP3Q5H9I0 405 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 TTC19Q6DKK2 380 aaPredicted RBP2.51□□□□□ -2.01
SMC4-225ENST00000497203 DNAJC24Q6P3W2 148 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 FAM71AQ8IYT1 594 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 PGAM4Q8N0Y7 254 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 SNX31Q8N9S9 440 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 OR56A4Q8NGH8 313 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 OR52E5Q8NH55 327 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 LRRC29Q8WV35 223 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 ISG20Q96AZ6 181 aaKnown RBP2.51□□□□□ -2.01
SMC4-225ENST00000497203 STARD4Q96DR4 205 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 CAMK2N2Q96S95 79 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 CALN1Q9BXU9 219 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 SPNS1Q9H2V7 528 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 BEX1Q9HBH7 125 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 CRLF2Q9HC73 371 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 ZC4H2Q9NQZ6 224 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 DDX19AQ9NUU7 478 aaKnown RBP2.51□□□□□ -2.01
SMC4-225ENST00000497203 ZNRD1Q9P1U0 126 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 PEF1Q9UBV8 284 aaKnown RBP2.51□□□□□ -2.01
SMC4-225ENST00000497203 ZNF282Q9UDV7 671 aaPredicted RBP2.51□□□□□ -2.01
SMC4-225ENST00000497203 RCL1Q9Y2P8 373 aaKnown RBP2.51□□□□□ -2.01
SMC4-225ENST00000497203 HYOU1Q9Y4L1 999 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 TMEM14AQ9Y6G1 99 aa2.51□□□□□ -2.01
SMC4-225ENST00000497203 GAKO14976 1311 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 IGKV2D-24A0A075B6R9 120 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 NCBP2LA6PVI3 153 aaKnown RBP2.5□□□□□ -2.01
SMC4-225ENST00000497203 SYCE1LA8MT33 242 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 BCKDKO14874 412 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 B4GALT5O43286 388 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 XRCC2O43543 280 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 IGFBP3P17936 291 aaPredicted RBP2.5□□□□□ -2.01
SMC4-225ENST00000497203 CSNK2A2P19784 350 aaPredicted RBP2.5□□□□□ -2.01
SMC4-225ENST00000497203 CLDN8P56748 225 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 SYNJ2BPP57105 145 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 ZNF121P58317 390 aaPredicted RBP2.5□□□□□ -2.01
SMC4-225ENST00000497203 RAB11AP62491 216 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 ESRRGP62508 458 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 RAB11BQ15907 218 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 KLHL40Q2TBA0 621 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 TRMT5Q32P41 509 aaKnown RBP2.5□□□□□ -2.01
SMC4-225ENST00000497203 FAM78AQ5JUQ0 283 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 AVPI1Q5T686 147 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 FAM71E1Q6IPT2 247 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 NANOGP8Q6NSW7 305 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 CEMP1Q6PRD7 247 aaPredicted RBP2.5□□□□□ -2.01
SMC4-225ENST00000497203 CALHM1Q8IU99 346 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 COX18Q8N8Q8 333 aa2.5□□□□□ -2.01
SMC4-225ENST00000497203 INO80EQ8NBZ0 244 aaPredicted RBP2.5□□□□□ -2.01
SMC4-225ENST00000497203 OR10G2Q8NGC3 310 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms