RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 RHOUQ7L0Q8 258 aa9.86□□□□□ -0.83
CMSS1-208ENST00000496116 BIVMQ86UB2 503 aa9.86□□□□□ -0.83
CMSS1-208ENST00000496116 FAM109AQ8N4B1 249 aa9.86□□□□□ -0.83
CMSS1-208ENST00000496116 CLEC1AQ8NC01 280 aa9.86□□□□□ -0.83
CMSS1-208ENST00000496116 OR5M1Q8NGP8 315 aa9.86□□□□□ -0.83
CMSS1-208ENST00000496116 MR1Q95460 341 aa9.86□□□□□ -0.83
CMSS1-208ENST00000496116 PBOV1Q9GZY1 135 aa9.86□□□□□ -0.83
CMSS1-208ENST00000496116 UPB1Q9UBR1 384 aa9.86□□□□□ -0.83
CMSS1-208ENST00000496116 U3KQ87 197 aa9.86□□□□□ -0.83
CMSS1-208ENST00000496116 A0A087WZY1 265 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 IGHV1-45A0A0A0MS14 117 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 MEIS3P1A6NDR6 274 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 ZNF726A6NNF4 738 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 SULT2B1O00204 365 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 TLX3O43711 291 aaPredicted RBP9.85□□□□□ -0.83
CMSS1-208ENST00000496116 TRAF3IP2O43734 574 aaPredicted RBP9.85□□□□□ -0.83
CMSS1-208ENST00000496116 TTRP02766 147 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 OPN1LWP04000 364 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 RLN1P04808 185 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 GIPP09681 153 aaPredicted RBP9.85□□□□□ -0.83
CMSS1-208ENST00000496116 RAB6AP20340 208 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 C4BPBP20851 252 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 SFTPDP35247 375 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 GNALP38405 381 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 ZNF81P51508 661 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 SLC35A1P78382 337 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 ZNF239Q16600 458 aaKnown RBP9.85□□□□□ -0.83
CMSS1-208ENST00000496116 TMEM176BQ3YBM2 270 aaPredicted RBP9.85□□□□□ -0.83
CMSS1-208ENST00000496116 PRAMEF20Q5VT98 475 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 THOC7Q6I9Y2 204 aaKnown RBP9.85□□□□□ -0.83
CMSS1-208ENST00000496116 STEAP1BQ6NZ63 245 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 TMEM81Q6P7N7 255 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 CDH26Q8IXH8 852 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 OR5D14Q8NGL3 314 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 MAFAQ8NHW3 353 aaPredicted RBP9.85□□□□□ -0.83
CMSS1-208ENST00000496116 FGGYQ96C11 551 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 NKX3-1Q99801 234 aaPredicted RBP9.85□□□□□ -0.83
CMSS1-208ENST00000496116 TMEM138Q9NPI0 162 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 RYDENQ9NUL5 291 aaKnown RBP9.85□□□□□ -0.83
CMSS1-208ENST00000496116 GDF2Q9UK05 429 aaPredicted RBP9.85□□□□□ -0.83
CMSS1-208ENST00000496116 ELF5Q9UKW6 265 aaPredicted RBP9.85□□□□□ -0.83
CMSS1-208ENST00000496116 PTRH2Q9Y3E5 179 aaKnown RBP9.85□□□□□ -0.83
CMSS1-208ENST00000496116 TNRC18O15417 2968 aaPredicted RBP9.85□□□□□ -0.83
CMSS1-208ENST00000496116 AQP7P3A6NL99 342 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 TNFRSF10AO00220 468 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 NTN3O00634 580 aaPredicted RBP9.85□□□□□ -0.83
CMSS1-208ENST00000496116 LDLRAD4O15165 306 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 LAMTOR5O43504 91 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 TOXO94900 526 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 CD3DP04234 171 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 ZNF28P17035 718 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 RAP2BP61225 183 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 GABREP78334 506 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 PMPCAQ10713 525 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 TAF13Q15543 124 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 LGALSLQ3ZCW2 172 aaPredicted RBP9.85□□□□□ -0.83
CMSS1-208ENST00000496116 PEAR1Q5VY43 1037 aaPredicted RBP9.85□□□□□ -0.83
CMSS1-208ENST00000496116 RAB12Q6IQ22 244 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 ZNF813Q6ZN06 617 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 GABRG1Q8N1C3 465 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 TMEM229BQ8NBD8 167 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 OR4D10Q8NGI6 311 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 OR51S1Q8NGJ8 323 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 OR8S1Q8NH09 359 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 M1APQ8TC57 530 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 SEH1LQ96EE3 360 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 CHIAQ9BZP6 476 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 ZNF700Q9H0M5 742 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 B3GNT2Q9NY97 397 aa9.85□□□□□ -0.83
CMSS1-208ENST00000496116 ZNF107Q9UII5 783 aaPredicted RBP9.85□□□□□ -0.83
CMSS1-208ENST00000496116 LOC102725191A0A1B0GVB3 256 aa9.84□□□□□ -0.83
CMSS1-208ENST00000496116 ERVH48-1M5A8F1 160 aa9.84□□□□□ -0.83
CMSS1-208ENST00000496116 NOS1APO75052 506 aaPredicted RBP9.84□□□□□ -0.83
CMSS1-208ENST00000496116 CYB5AP00167 134 aa9.84□□□□□ -0.83
CMSS1-208ENST00000496116 ERCC1P07992 297 aaPredicted RBP9.84□□□□□ -0.83
CMSS1-208ENST00000496116 TDGF1P13385 188 aa9.84□□□□□ -0.83
CMSS1-208ENST00000496116 RAB3AP20336 220 aa9.84□□□□□ -0.83
CMSS1-208ENST00000496116 TSPAN5P62079 268 aa9.84□□□□□ -0.83
CMSS1-208ENST00000496116 CARD17Q5XLA6 110 aa9.84□□□□□ -0.83
CMSS1-208ENST00000496116 SLC25A47Q6Q0C1 308 aa9.84□□□□□ -0.83
CMSS1-208ENST00000496116 TMPPEQ6ZT21 453 aa9.84□□□□□ -0.83
CMSS1-208ENST00000496116 FTMTQ8N4E7 242 aa9.84□□□□□ -0.83
CMSS1-208ENST00000496116 SLC22A24Q8N4F4 322 aa9.84□□□□□ -0.83
CMSS1-208ENST00000496116 OR1M1Q8NGA1 313 aa9.84□□□□□ -0.83
CMSS1-208ENST00000496116 OR10S1Q8NGN2 331 aa9.84□□□□□ -0.83
CMSS1-208ENST00000496116 GAL3ST1Q99999 423 aa9.84□□□□□ -0.83
CMSS1-208ENST00000496116 UQCC2Q9BRT2 126 aa9.84□□□□□ -0.83
CMSS1-208ENST00000496116 IRF2BPLQ9H1B7 796 aa9.84□□□□□ -0.83
CMSS1-208ENST00000496116 RAB22AQ9UL26 194 aa9.84□□□□□ -0.83
CMSS1-208ENST00000496116 LHFPL6Q9Y693 200 aa9.84□□□□□ -0.83
CMSS1-208ENST00000496116 LOC101059948A0A1B0GTJ6 334 aa9.83□□□□□ -0.84
CMSS1-208ENST00000496116 C19orf67A6NJJ6 358 aa9.83□□□□□ -0.84
CMSS1-208ENST00000496116 GDF9O60383 454 aa9.83□□□□□ -0.84
CMSS1-208ENST00000496116 LMX1BO60663 402 aa9.83□□□□□ -0.84
CMSS1-208ENST00000496116 SCGNO76038 276 aa9.83□□□□□ -0.84
CMSS1-208ENST00000496116 SLC34A2O95436 690 aa9.83□□□□□ -0.84
CMSS1-208ENST00000496116 RAB3DO95716 219 aa9.83□□□□□ -0.84
CMSS1-208ENST00000496116 PMS2P2O95744 297 aa9.83□□□□□ -0.84
CMSS1-208ENST00000496116 IFNA7P01567 189 aa9.83□□□□□ -0.84
CMSS1-208ENST00000496116 UMODP07911 640 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms