RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 POLE3Q9NRF9 147 aa7.91□□□□□ -1.14
SMARCAL1-213ENST00000496037 ZNRD1Q9P1U0 126 aa7.91□□□□□ -1.14
SMARCAL1-213ENST00000496037 B3GAT1Q9P2W7 334 aa7.91□□□□□ -1.14
SMARCAL1-213ENST00000496037 IL19Q9UHD0 177 aa7.91□□□□□ -1.14
SMARCAL1-213ENST00000496037 A0A096LPI6 279 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 LOC102723971A0A1B0GUV8 181 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 FAM90A18PA6NE21 464 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 FAM90A16PA6NEW6 464 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 FAM90A9PA6NNJ1 464 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 FAM90A5PA8MXJ8 464 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 TMEM178BH3BS89 294 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 RAB27BO00194 218 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 CFLARO15519 480 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 FARS2O95363 451 aaKnown RBP7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 C6orf47O95873 294 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 IFNW1P05000 195 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 CD1AP06126 327 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 VIMP08670 466 aaKnown RBP7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 FAM90A15PP0C7V4 464 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 FAM90A14PP0C7W9 464 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 CD28P10747 220 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 CCNOP22674 350 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 APLNRP35414 380 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 RPL3P39023 403 aaKnown RBP7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 MPV17P39210 176 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 CRATP43155 626 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 FOXA1P55317 472 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 KIAA0040Q15053 153 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 LSM12Q3MHD2 195 aaKnown RBP7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 UEVLDQ8IX04 471 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 KLHL7Q8IXQ5 586 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 PDZD9Q8IXQ8 264 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 PEX5LQ8IYB4 626 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 CADM2Q8N3J6 435 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 DTX3Q8N9I9 347 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 POC5Q8NA72 575 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 MFSD8Q8NHS3 518 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 PSMA8Q8TAA3 256 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 PNPT1Q8TCS8 783 aaKnown RBP7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 MAP6Q96JE9 813 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 SLC35G5Q96KT7 338 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 LRR1Q96L50 414 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 MAGEB18Q96M61 343 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 WDFY2Q96P53 400 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 NSRP1Q9H0G5 558 aaKnown RBP7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 C1orf109Q9NX04 203 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 EIF3KQ9UBQ5 218 aaKnown RBP7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 BAIAP2L1Q9UHR4 511 aa7.9□□□□□ -1.14
SMARCAL1-213ENST00000496037 hCG_1809904A0A1W2PP81 198 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 A0A1W2PPE2 198 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 A0A1W2PR64 198 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 GAGE10A6NGK3 116 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 AIM2O14862 343 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 SURF4O15260 269 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 TIMM8AO60220 97 aaPredicted RBP7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 ANP32DO95626 131 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 PAHP00439 452 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 LIPFP07098 398 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 GUSBP08236 651 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 RPSAP08865 295 aaKnown RBP7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 MMP9P14780 707 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 RPS5P46782 204 aaKnown RBP7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 ANXA11P50995 505 aaKnown RBP7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 GMFBP60983 142 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 COPZ1P61923 177 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 RPL38P63173 70 aaKnown RBP7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 CALCOCO2Q13137 446 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 DYNC1I2Q13409 638 aaKnown RBP7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 GNA13Q14344 377 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 SLC36A2Q495M3 483 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 GALNTL6Q49A17 601 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 MTX3Q5HYI7 312 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 WDR25Q64LD2 544 aaPredicted RBP7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 ADAMTSL5Q6ZMM2 481 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 DPPA2Q7Z7J5 298 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 CROCCP2Q86T23 111 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 SLC22A24Q8N4F4 322 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 PNLDC1Q8NA58 520 aaKnown RBP7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 SDR9C7Q8NEX9 313 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 OR2Z1Q8NG97 314 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 FGFBP3Q8TAT2 258 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 SLC25A40Q8TBP6 338 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 KLF14Q8TD94 323 aaPredicted RBP7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 ABHD1Q96SE0 405 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 TMEM246Q9BRR3 403 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 EMC6Q9BV81 110 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 CHID1Q9BWS9 393 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 OR2J1Q9GZK6 312 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 RANBP3Q9H6Z4 567 aaPredicted RBP7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 TMEM140Q9NV12 185 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 ATAD3AQ9NVI7 634 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 SLC25A10Q9UBX3 287 aaPredicted RBP7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 SNX24Q9Y343 169 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 FRAS1Q86XX4 4008 aa7.89□□□□□ -1.15
SMARCAL1-213ENST00000496037 PLECQ15149 4684 aaKnown RBP7.88□□□□□ -1.15
SMARCAL1-213ENST00000496037 TMEM233B4DJY2 109 aa7.88□□□□□ -1.15
SMARCAL1-213ENST00000496037 FTCDNL1E5RQL4 147 aa7.88□□□□□ -1.15
SMARCAL1-213ENST00000496037 H3BSA7 217 aa7.88□□□□□ -1.15
SMARCAL1-213ENST00000496037 IFNL4K9M1U5 179 aa7.88□□□□□ -1.15
SMARCAL1-213ENST00000496037 ANGPTL7O43827 346 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms