RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 EFNA4P52798 201 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 KLF3P57682 345 aaPredicted RBP8.43□□□□□ -1.06
CALD1-223ENST00000496024 ESRRGP62508 458 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 HIST1H3AP68431 136 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 GABPB1Q06547 395 aaPredicted RBP8.43□□□□□ -1.06
CALD1-223ENST00000496024 TNK1Q13470 666 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 ZNF718Q3SXZ3 478 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 ZIK1Q3SY52 487 aaPredicted RBP8.43□□□□□ -1.06
CALD1-223ENST00000496024 HIST2H3PS2Q5TEC6 136 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 LINC01590Q5TEZ4 76 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 PRSS57Q6UWY2 283 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 UNQ6126/PRO20091Q6UXV3 157 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 HIST2H3AQ71DI3 136 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 CXXC5Q7LFL8 322 aaKnown RBP8.43□□□□□ -1.06
CALD1-223ENST00000496024 DCXRQ7Z4W1 244 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 ZNF525Q8N782 197 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 TCEANCQ8N8B7 351 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 OR6N2Q8NGY6 317 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 MAP6Q96JE9 813 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 IL4I1Q96RQ9 567 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 INTS14Q96SY0 518 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 COQ7Q99807 217 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 RBM4BQ9BQ04 359 aaKnown RBP8.43□□□□□ -1.06
CALD1-223ENST00000496024 OSBPL10Q9BXB5 764 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 RAB1BQ9H0U4 201 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 POFUT1Q9H488 388 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 CENPMQ9NSP4 180 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 KCNG2Q9UJ96 466 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 STARD10Q9Y365 291 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 ZANQ9Y493 2812 aa8.43□□□□□ -1.06
CALD1-223ENST00000496024 ZAR1LA6NP61 321 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 M0R233 179 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 TLX2O43763 284 aaPredicted RBP8.42□□□□□ -1.06
CALD1-223ENST00000496024 PRKYO43930 277 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 SELENOFO60613 162 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 F12P00748 615 aaPredicted RBP8.42□□□□□ -1.06
CALD1-223ENST00000496024 ERCC1P07992 297 aaPredicted RBP8.42□□□□□ -1.06
CALD1-223ENST00000496024 NAT2P11245 290 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 ZNF250P15622 560 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 NAA10P41227 235 aaPredicted RBP8.42□□□□□ -1.06
CALD1-223ENST00000496024 EVX1P49640 407 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 PPOXP50336 477 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 BLVRAP53004 296 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 PPP2R2BQ00005 443 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 APOFQ13790 326 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 EIF2B1Q14232 305 aaKnown RBP8.42□□□□□ -1.06
CALD1-223ENST00000496024 TAF13Q15543 124 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 RSPO1Q2MKA7 263 aaPredicted RBP8.42□□□□□ -1.06
CALD1-223ENST00000496024 SLX4IPQ5VYV7 408 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 CLEC2AQ6UVW9 174 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 DPY19L4Q7Z388 723 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 BCDIN3DQ7Z5W3 292 aaKnown RBP8.42□□□□□ -1.06
CALD1-223ENST00000496024 NAA40Q86UY6 237 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 PQLC1Q8N2U9 271 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 CIARTQ8N365 385 aaPredicted RBP8.42□□□□□ -1.06
CALD1-223ENST00000496024 CBR4Q8N4T8 237 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 MAPK1IP1LQ8NDC0 245 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 OR10S1Q8NGN2 331 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 KLF14Q8TD94 323 aaPredicted RBP8.42□□□□□ -1.06
CALD1-223ENST00000496024 SNX33Q8WV41 574 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 IPCEF1Q8WWN9 437 aaPredicted RBP8.42□□□□□ -1.06
CALD1-223ENST00000496024 GTF3AQ92664 365 aaKnown RBP8.42□□□□□ -1.06
CALD1-223ENST00000496024 SLAMF6Q96DU3 332 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 MARS2Q96GW9 593 aaKnown RBP8.42□□□□□ -1.06
CALD1-223ENST00000496024 ATF6BQ99941 703 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 COPS4Q9BT78 406 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 TMUB1Q9BVT8 246 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 PTTG3PQ9NZH4 202 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 ENOPH1Q9UHY7 261 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 N6AMT1Q9Y5N5 214 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 ORC6Q9Y5N6 252 aa8.42□□□□□ -1.06
CALD1-223ENST00000496024 IGHV4-30-2A0A087WSY4 118 aa8.41□□□□□ -1.06
CALD1-223ENST00000496024 RNF223E7ERA6 249 aa8.41□□□□□ -1.06
CALD1-223ENST00000496024 TIMM8AO60220 97 aaPredicted RBP8.41□□□□□ -1.06
CALD1-223ENST00000496024 LCATP04180 440 aa8.41□□□□□ -1.06
CALD1-223ENST00000496024 MRPL3P09001 348 aaKnown RBP8.41□□□□□ -1.06
CALD1-223ENST00000496024 SLC6A9P48067 706 aa8.41□□□□□ -1.06
CALD1-223ENST00000496024 PRKXP51817 358 aa8.41□□□□□ -1.06
CALD1-223ENST00000496024 ECH1Q13011 328 aa8.41□□□□□ -1.06
CALD1-223ENST00000496024 C12orf73Q69YU5 71 aa8.41□□□□□ -1.06
CALD1-223ENST00000496024 DCLRE1CQ96SD1 692 aaKnown RBP8.41□□□□□ -1.06
CALD1-223ENST00000496024 RHNO1Q9BSD3 238 aa8.41□□□□□ -1.06
CALD1-223ENST00000496024 C9orf16Q9BUW7 83 aa8.41□□□□□ -1.06
CALD1-223ENST00000496024 PRRG3Q9BZD7 231 aa8.41□□□□□ -1.06
CALD1-223ENST00000496024 MS4A5Q9H3V2 200 aa8.41□□□□□ -1.06
CALD1-223ENST00000496024 PNRC2Q9NPJ4 139 aaKnown RBP8.41□□□□□ -1.06
CALD1-223ENST00000496024 TBCCD1Q9NVR7 557 aa8.41□□□□□ -1.06
CALD1-223ENST00000496024 H2AFY2Q9P0M6 372 aaPredicted RBP8.41□□□□□ -1.06
CALD1-223ENST00000496024 ATPIF1Q9UII2 106 aa8.41□□□□□ -1.06
CALD1-223ENST00000496024 GPR160Q9UJ42 338 aa8.41□□□□□ -1.06
CALD1-223ENST00000496024 IGLV3-9A0A075B6K5 115 aa8.4□□□□□ -1.06
CALD1-223ENST00000496024 CCDC182A6NF36 153 aa8.4□□□□□ -1.06
CALD1-223ENST00000496024 LYNX1G3V0Z9 82 aa8.4□□□□□ -1.06
CALD1-223ENST00000496024 M0R135 149 aa8.4□□□□□ -1.06
CALD1-223ENST00000496024 PRODHO43272 600 aa8.4□□□□□ -1.06
CALD1-223ENST00000496024 TPD52L2O43399 206 aaKnown RBP8.4□□□□□ -1.06
CALD1-223ENST00000496024 SPRY3O43610 288 aa8.4□□□□□ -1.06
CALD1-223ENST00000496024 IGHV3-13P01766 116 aa8.4□□□□□ -1.06
CALD1-223ENST00000496024 ALPLP05186 524 aa8.4□□□□□ -1.06
CALD1-223ENST00000496024 ACSM4P0C7M7 580 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms