RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 ATG16L2Q8NAA4 619 aa18.54■□□□□ 0.56
HDDC3-203ENST00000494993 C1orf147Q96MC9 270 aaPredicted RBP18.54■□□□□ 0.56
HDDC3-203ENST00000494993 DUX5Q96PT3 197 aa18.54■□□□□ 0.56
HDDC3-203ENST00000494993 GPX7Q96SL4 187 aaPredicted RBP18.54■□□□□ 0.56
HDDC3-203ENST00000494993 C1QTNF5Q9BXJ0 243 aa18.54■□□□□ 0.56
HDDC3-203ENST00000494993 NRIP3Q9NQ35 241 aa18.54■□□□□ 0.56
HDDC3-203ENST00000494993 PTTG3PQ9NZH4 202 aa18.54■□□□□ 0.56
HDDC3-203ENST00000494993 LRCH1Q9Y2L9 728 aa18.54■□□□□ 0.56
HDDC3-203ENST00000494993 ENPP4Q9Y6X5 453 aa18.54■□□□□ 0.56
HDDC3-203ENST00000494993 TRRAPQ9Y4A5 3859 aa18.54■□□□□ 0.56
HDDC3-203ENST00000494993 IMPA2O14732 288 aa18.53■□□□□ 0.56
HDDC3-203ENST00000494993 RER1O15258 196 aa18.53■□□□□ 0.56
HDDC3-203ENST00000494993 PTP4A3O75365 173 aa18.53■□□□□ 0.56
HDDC3-203ENST00000494993 DBHP09172 617 aa18.53■□□□□ 0.56
HDDC3-203ENST00000494993 SLC7A2P52569 658 aa18.53■□□□□ 0.56
HDDC3-203ENST00000494993 HLXQ14774 488 aaPredicted RBP18.53■□□□□ 0.56
HDDC3-203ENST00000494993 SLC27A4Q6P1M0 643 aa18.53■□□□□ 0.56
HDDC3-203ENST00000494993 SHISA2Q6UWI4 295 aa18.53■□□□□ 0.56
HDDC3-203ENST00000494993 MEGF10Q96KG7 1140 aa18.53■□□□□ 0.56
HDDC3-203ENST00000494993 ZNF48Q96MX3 618 aaPredicted RBP18.53■□□□□ 0.56
HDDC3-203ENST00000494993 MEGF8Q7Z7M0 2845 aa18.53■□□□□ 0.56
HDDC3-203ENST00000494993 SOCS2O14508 198 aa18.52■□□□□ 0.56
HDDC3-203ENST00000494993 TMPRSS2O15393 492 aa18.52■□□□□ 0.56
HDDC3-203ENST00000494993 WNT2P09544 360 aa18.52■□□□□ 0.56
HDDC3-203ENST00000494993 GSK3BP49841 420 aa18.52■□□□□ 0.56
HDDC3-203ENST00000494993 PAX8Q06710 450 aa18.52■□□□□ 0.56
HDDC3-203ENST00000494993 BAMBIQ13145 260 aa18.52■□□□□ 0.56
HDDC3-203ENST00000494993 KCNMB1Q16558 191 aa18.52■□□□□ 0.56
HDDC3-203ENST00000494993 PRR31Q5SQ13 230 aa18.52■□□□□ 0.56
HDDC3-203ENST00000494993 OR2T2Q6IF00 324 aa18.52■□□□□ 0.56
HDDC3-203ENST00000494993 PTCHD4Q6ZW05 846 aa18.52■□□□□ 0.56
HDDC3-203ENST00000494993 ADCK1Q86TW2 530 aa18.52■□□□□ 0.56
HDDC3-203ENST00000494993 OR8G5Q8NG78 346 aa18.52■□□□□ 0.56
HDDC3-203ENST00000494993 OR10AD1Q8NGE0 317 aa18.52■□□□□ 0.56
HDDC3-203ENST00000494993 OR5L1Q8NGL2 311 aa18.52■□□□□ 0.56
HDDC3-203ENST00000494993 ZNF420Q8TAQ5 688 aaPredicted RBP18.52■□□□□ 0.56
HDDC3-203ENST00000494993 HOPXQ9BPY8 73 aaPredicted RBP18.52■□□□□ 0.56
HDDC3-203ENST00000494993 SSBP3Q9BWW4 388 aaPredicted RBP18.52■□□□□ 0.56
HDDC3-203ENST00000494993 NUAK2Q9H093 628 aa18.52■□□□□ 0.56
HDDC3-203ENST00000494993 IL20RAQ9UHF4 553 aa18.52■□□□□ 0.56
HDDC3-203ENST00000494993 POLR1DQ9Y2S0 133 aa18.52■□□□□ 0.56
HDDC3-203ENST00000494993 A0A1W2PRQ8 180 aa18.51■□□□□ 0.55
HDDC3-203ENST00000494993 H1F0P07305 194 aaKnown RBP18.51■□□□□ 0.55
HDDC3-203ENST00000494993 COX4I1P13073 169 aa18.51■□□□□ 0.55
HDDC3-203ENST00000494993 CPT2P23786 658 aa18.51■□□□□ 0.55
HDDC3-203ENST00000494993 CD80P33681 288 aa18.51■□□□□ 0.55
HDDC3-203ENST00000494993 DGCR6Q14129 220 aa18.51■□□□□ 0.55
HDDC3-203ENST00000494993 C8orf82Q6P1X6 216 aaPredicted RBP18.51■□□□□ 0.55
HDDC3-203ENST00000494993 OR13G1Q8NGZ3 307 aa18.51■□□□□ 0.55
HDDC3-203ENST00000494993 FAM162AQ96A26 154 aa18.51■□□□□ 0.55
HDDC3-203ENST00000494993 APOBEC3DQ96AK3 386 aaPredicted RBP18.51■□□□□ 0.55
HDDC3-203ENST00000494993 RSRC1Q96IZ7 334 aaKnown RBP18.51■□□□□ 0.55
HDDC3-203ENST00000494993 MS4A7Q9GZW8 240 aaPredicted RBP18.51■□□□□ 0.55
HDDC3-203ENST00000494993 TMEM165Q9HC07 324 aa18.51■□□□□ 0.55
HDDC3-203ENST00000494993 IER3IP1Q9Y5U9 82 aa18.51■□□□□ 0.55
HDDC3-203ENST00000494993 H0YL77 283 aa18.5■□□□□ 0.55
HDDC3-203ENST00000494993 CYB5R3P00387 301 aaPredicted RBP18.5■□□□□ 0.55
HDDC3-203ENST00000494993 RNASE1P07998 156 aaKnown RBP18.5■□□□□ 0.55
HDDC3-203ENST00000494993 RPS2P15880 293 aaKnown RBP18.5■□□□□ 0.55
HDDC3-203ENST00000494993 OMPP47874 163 aa18.5■□□□□ 0.55
HDDC3-203ENST00000494993 SRP9P49458 86 aaKnown RBP18.5■□□□□ 0.55
HDDC3-203ENST00000494993 FXYD6P3P58550 94 aa18.5■□□□□ 0.55
HDDC3-203ENST00000494993 PAX2Q02962 417 aa18.5■□□□□ 0.55
HDDC3-203ENST00000494993 FGD3Q5JSP0 725 aa18.5■□□□□ 0.55
HDDC3-203ENST00000494993 KLBQ86Z14 1044 aa18.5■□□□□ 0.55
HDDC3-203ENST00000494993 PARP8Q8N3A8 854 aa18.5■□□□□ 0.55
HDDC3-203ENST00000494993 OR52E2Q8NGJ4 325 aa18.5■□□□□ 0.55
HDDC3-203ENST00000494993 ZNF582Q96NG8 517 aaPredicted RBP18.5■□□□□ 0.55
HDDC3-203ENST00000494993 COQ7Q99807 217 aa18.5■□□□□ 0.55
HDDC3-203ENST00000494993 HDHD2Q9H0R4 259 aa18.5■□□□□ 0.55
HDDC3-203ENST00000494993 ZNF696Q9H7X3 374 aa18.5■□□□□ 0.55
HDDC3-203ENST00000494993 MLNRO43193 412 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 ZNF205O95201 554 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 GPANK1O95872 356 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 TXNDC12O95881 172 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 PPIAL4GP0DN37 164 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 NCK1P16333 377 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 CDKN2AP42771 156 aaKnown RBP18.49■□□□□ 0.55
HDDC3-203ENST00000494993 RPS6KA3P51812 740 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 HIST1H3AP68431 136 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 HIST2H3PS2Q5TEC6 136 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 PGM2L1Q6PCE3 622 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 BTNL3Q6UXE8 466 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 LRRN1Q6UXK5 716 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 DPY19L2P2Q6ZN68 376 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 HIST2H3AQ71DI3 136 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 GJC3Q8NFK1 279 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 SLC25A28Q96A46 364 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 TSSK2Q96PF2 358 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 SLC30A2Q9BRI3 323 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 MIOXQ9UGB7 285 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 RPS6KA6Q9UK32 745 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 AURKCQ9UQB9 309 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 FAM32AQ9Y421 112 aaKnown RBP18.49■□□□□ 0.55
HDDC3-203ENST00000494993 LHFPL6Q9Y693 200 aa18.49■□□□□ 0.55
HDDC3-203ENST00000494993 IGHV2-70DA0A0C4DH43 119 aa18.48■□□□□ 0.55
HDDC3-203ENST00000494993 IQCF6A8MYZ5 107 aa18.48■□□□□ 0.55
HDDC3-203ENST00000494993 CLDN34H7C241 214 aa18.48■□□□□ 0.55
HDDC3-203ENST00000494993 IGHV4-38-2P0DP08 117 aa18.48■□□□□ 0.55
HDDC3-203ENST00000494993 CRABP1P29762 137 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms