RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 OR5L1Q8NGL2 311 aa19.52■□□□□ 0.72
COL27A1-208ENST00000494780 RERGLQ9H628 205 aa19.52■□□□□ 0.72
COL27A1-208ENST00000494780 PCDHGB1Q9Y5G3 927 aa19.52■□□□□ 0.72
COL27A1-208ENST00000494780 A0A1W2PRQ8 180 aa19.51■□□□□ 0.71
COL27A1-208ENST00000494780 CEACAM18A8MTB9 384 aa19.51■□□□□ 0.71
COL27A1-208ENST00000494780 NME4O00746 187 aa19.51■□□□□ 0.71
COL27A1-208ENST00000494780 COX4I1P13073 169 aa19.51■□□□□ 0.71
COL27A1-208ENST00000494780 DGCR6Q14129 220 aa19.51■□□□□ 0.71
COL27A1-208ENST00000494780 KCNMB1Q16558 191 aa19.51■□□□□ 0.71
COL27A1-208ENST00000494780 OTPQ5XKR4 325 aa19.51■□□□□ 0.71
COL27A1-208ENST00000494780 SHISA2Q6UWI4 295 aa19.51■□□□□ 0.71
COL27A1-208ENST00000494780 TSEN54Q7Z6J9 526 aaKnown RBP19.51■□□□□ 0.71
COL27A1-208ENST00000494780 OR5AS1Q8N127 324 aa19.51■□□□□ 0.71
COL27A1-208ENST00000494780 OR8G5Q8NG78 346 aa19.51■□□□□ 0.71
COL27A1-208ENST00000494780 PTTG3PQ9NZH4 202 aa19.51■□□□□ 0.71
COL27A1-208ENST00000494780 IL20RAQ9UHF4 553 aa19.51■□□□□ 0.71
COL27A1-208ENST00000494780 DNAJC9-AS1A6NH13 148 aa19.5■□□□□ 0.71
COL27A1-208ENST00000494780 NDUFAB1O14561 156 aa19.5■□□□□ 0.71
COL27A1-208ENST00000494780 RER1O15258 196 aa19.5■□□□□ 0.71
COL27A1-208ENST00000494780 H1F0P07305 194 aaKnown RBP19.5■□□□□ 0.71
COL27A1-208ENST00000494780 DBHP09172 617 aa19.5■□□□□ 0.71
COL27A1-208ENST00000494780 WNT2P09544 360 aa19.5■□□□□ 0.71
COL27A1-208ENST00000494780 GSK3BP49841 420 aa19.5■□□□□ 0.71
COL27A1-208ENST00000494780 PAX8Q06710 450 aa19.5■□□□□ 0.71
COL27A1-208ENST00000494780 HLXQ14774 488 aaPredicted RBP19.5■□□□□ 0.71
COL27A1-208ENST00000494780 OR2T2Q6IF00 324 aa19.5■□□□□ 0.71
COL27A1-208ENST00000494780 C8orf82Q6P1X6 216 aaPredicted RBP19.5■□□□□ 0.71
COL27A1-208ENST00000494780 BCL6BQ8N143 479 aaPredicted RBP19.5■□□□□ 0.71
COL27A1-208ENST00000494780 OR13G1Q8NGZ3 307 aa19.5■□□□□ 0.71
COL27A1-208ENST00000494780 FAM162AQ96A26 154 aa19.5■□□□□ 0.71
COL27A1-208ENST00000494780 APOBEC3DQ96AK3 386 aaPredicted RBP19.5■□□□□ 0.71
COL27A1-208ENST00000494780 MEGF10Q96KG7 1140 aa19.5■□□□□ 0.71
COL27A1-208ENST00000494780 NUAK2Q9H093 628 aa19.5■□□□□ 0.71
COL27A1-208ENST00000494780 POLR1DQ9Y2S0 133 aa19.5■□□□□ 0.71
COL27A1-208ENST00000494780 SOCS2O14508 198 aa19.49■□□□□ 0.71
COL27A1-208ENST00000494780 TXNDC12O95881 172 aa19.49■□□□□ 0.71
COL27A1-208ENST00000494780 PPIAL4GP0DN37 164 aa19.49■□□□□ 0.71
COL27A1-208ENST00000494780 OMPP47874 163 aa19.49■□□□□ 0.71
COL27A1-208ENST00000494780 SRP9P49458 86 aaKnown RBP19.49■□□□□ 0.71
COL27A1-208ENST00000494780 HIST1H3AP68431 136 aa19.49■□□□□ 0.71
COL27A1-208ENST00000494780 BAMBIQ13145 260 aa19.49■□□□□ 0.71
COL27A1-208ENST00000494780 HIST2H3PS2Q5TEC6 136 aa19.49■□□□□ 0.71
COL27A1-208ENST00000494780 PGM2L1Q6PCE3 622 aa19.49■□□□□ 0.71
COL27A1-208ENST00000494780 DPY19L2P2Q6ZN68 376 aa19.49■□□□□ 0.71
COL27A1-208ENST00000494780 PTCHD4Q6ZW05 846 aa19.49■□□□□ 0.71
COL27A1-208ENST00000494780 HIST2H3AQ71DI3 136 aa19.49■□□□□ 0.71
COL27A1-208ENST00000494780 GJC3Q8NFK1 279 aa19.49■□□□□ 0.71
COL27A1-208ENST00000494780 OR10AD1Q8NGE0 317 aa19.49■□□□□ 0.71
COL27A1-208ENST00000494780 RSRC1Q96IZ7 334 aaKnown RBP19.49■□□□□ 0.71
COL27A1-208ENST00000494780 ZNF582Q96NG8 517 aaPredicted RBP19.49■□□□□ 0.71
COL27A1-208ENST00000494780 COQ7Q99807 217 aa19.49■□□□□ 0.71
COL27A1-208ENST00000494780 SSBP3Q9BWW4 388 aaPredicted RBP19.49■□□□□ 0.71
COL27A1-208ENST00000494780 EFCAB1Q9HAE3 211 aa19.49■□□□□ 0.71
COL27A1-208ENST00000494780 TMEM165Q9HC07 324 aa19.49■□□□□ 0.71
COL27A1-208ENST00000494780 RPS6KA6Q9UK32 745 aa19.49■□□□□ 0.71
COL27A1-208ENST00000494780 FAM32AQ9Y421 112 aaKnown RBP19.49■□□□□ 0.71
COL27A1-208ENST00000494780 IER3IP1Q9Y5U9 82 aa19.49■□□□□ 0.71
COL27A1-208ENST00000494780 IMPA2O14732 288 aa19.48■□□□□ 0.71
COL27A1-208ENST00000494780 TMPRSS2O15393 492 aa19.48■□□□□ 0.71
COL27A1-208ENST00000494780 CD80P33681 288 aa19.48■□□□□ 0.71
COL27A1-208ENST00000494780 RPS6KA3P51812 740 aa19.48■□□□□ 0.71
COL27A1-208ENST00000494780 PAX2Q02962 417 aa19.48■□□□□ 0.71
COL27A1-208ENST00000494780 FGD3Q5JSP0 725 aa19.48■□□□□ 0.71
COL27A1-208ENST00000494780 PRR31Q5SQ13 230 aa19.48■□□□□ 0.71
COL27A1-208ENST00000494780 DNM1P34Q6PK57 102 aa19.48■□□□□ 0.71
COL27A1-208ENST00000494780 LRRN1Q6UXK5 716 aa19.48■□□□□ 0.71
COL27A1-208ENST00000494780 OR52E2Q8NGJ4 325 aa19.48■□□□□ 0.71
COL27A1-208ENST00000494780 C1orf147Q96MC9 270 aaPredicted RBP19.48■□□□□ 0.71
COL27A1-208ENST00000494780 ZNF48Q96MX3 618 aaPredicted RBP19.48■□□□□ 0.71
COL27A1-208ENST00000494780 DUX5Q96PT3 197 aa19.48■□□□□ 0.71
COL27A1-208ENST00000494780 MS4A7Q9GZW8 240 aaPredicted RBP19.48■□□□□ 0.71
COL27A1-208ENST00000494780 HDHD2Q9H0R4 259 aa19.48■□□□□ 0.71
COL27A1-208ENST00000494780 KRCC1Q9NPI7 259 aaPredicted RBP19.48■□□□□ 0.71
COL27A1-208ENST00000494780 MIOXQ9UGB7 285 aa19.48■□□□□ 0.71
COL27A1-208ENST00000494780 AURKCQ9UQB9 309 aa19.48■□□□□ 0.71
COL27A1-208ENST00000494780 CLDN34H7C241 214 aa19.47■□□□□ 0.71
COL27A1-208ENST00000494780 FSTL3O95633 263 aa19.47■□□□□ 0.71
COL27A1-208ENST00000494780 RNASE1P07998 156 aaKnown RBP19.47■□□□□ 0.71
COL27A1-208ENST00000494780 RPS2P15880 293 aaKnown RBP19.47■□□□□ 0.71
COL27A1-208ENST00000494780 RHCEP18577 417 aa19.47■□□□□ 0.71
COL27A1-208ENST00000494780 CRABP1P29762 137 aa19.47■□□□□ 0.71
COL27A1-208ENST00000494780 CDKN2AP42771 156 aaKnown RBP19.47■□□□□ 0.71
COL27A1-208ENST00000494780 FXYD6P3P58550 94 aa19.47■□□□□ 0.71
COL27A1-208ENST00000494780 ZNF181Q2M3W8 571 aa19.47■□□□□ 0.71
COL27A1-208ENST00000494780 BTNL3Q6UXE8 466 aa19.47■□□□□ 0.71
COL27A1-208ENST00000494780 HACD2Q6Y1H2 254 aa19.47■□□□□ 0.71
COL27A1-208ENST00000494780 KLBQ86Z14 1044 aa19.47■□□□□ 0.71
COL27A1-208ENST00000494780 ZNF420Q8TAQ5 688 aaPredicted RBP19.47■□□□□ 0.71
COL27A1-208ENST00000494780 KCTD14Q9BQ13 255 aaPredicted RBP19.47■□□□□ 0.71
COL27A1-208ENST00000494780 SLC30A2Q9BRI3 323 aa19.47■□□□□ 0.71
COL27A1-208ENST00000494780 C1QTNF5Q9BXJ0 243 aa19.47■□□□□ 0.71
COL27A1-208ENST00000494780 CCDC134Q9H6E4 229 aa19.47■□□□□ 0.71
COL27A1-208ENST00000494780 ZNF696Q9H7X3 374 aa19.47■□□□□ 0.71
COL27A1-208ENST00000494780 NDUFAF4Q9P032 175 aa19.47■□□□□ 0.71
COL27A1-208ENST00000494780 LHFPL6Q9Y693 200 aa19.47■□□□□ 0.71
COL27A1-208ENST00000494780 UNC119BA6NIH7 251 aa19.46■□□□□ 0.71
COL27A1-208ENST00000494780 LRRC30A6NM36 301 aa19.46■□□□□ 0.71
COL27A1-208ENST00000494780 IQCF6A8MYZ5 107 aa19.46■□□□□ 0.71
COL27A1-208ENST00000494780 H0YL77 283 aa19.46■□□□□ 0.71
COL27A1-208ENST00000494780 CCDC22O60826 627 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms