RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 MARS2Q96GW9 593 aaKnown RBP11.63□□□□□ -0.55
COL1A1-208ENST00000494334 IL4I1Q96RQ9 567 aa11.63□□□□□ -0.55
COL1A1-208ENST00000494334 DCLRE1CQ96SD1 692 aaKnown RBP11.63□□□□□ -0.55
COL1A1-208ENST00000494334 TEAD3Q99594 435 aa11.63□□□□□ -0.55
COL1A1-208ENST00000494334 ATF6BQ99941 703 aa11.63□□□□□ -0.55
COL1A1-208ENST00000494334 TBCCD1Q9NVR7 557 aa11.63□□□□□ -0.55
COL1A1-208ENST00000494334 MYEF2Q9P2K5 600 aaKnown RBP11.63□□□□□ -0.55
COL1A1-208ENST00000494334 DUSP13Q9UII6 198 aa11.63□□□□□ -0.55
COL1A1-208ENST00000494334 LRBAP50851 2863 aa11.63□□□□□ -0.55
COL1A1-208ENST00000494334 IGLV3-9A0A075B6K5 115 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 F5H5K5 113 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 SELENOFO60613 162 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 IGHV4-39P01824 125 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 PPP1CBP62140 327 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 ECH1Q13011 328 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 EIF2B1Q14232 305 aaKnown RBP11.62□□□□□ -0.55
COL1A1-208ENST00000494334 ZNF718Q3SXZ3 478 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 Q5PR19 223 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 SPATA46Q5T0L3 261 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 NXNL2Q5VZ03 156 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 PRSS57Q6UWY2 283 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 SPNS3Q6ZMD2 512 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 MEPCEQ7L2J0 689 aaKnown RBP11.62□□□□□ -0.55
COL1A1-208ENST00000494334 SHFQ7M4L6 423 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 C1orf174Q8IYL3 243 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 WFDC11Q8NEX6 87 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 SYNPRQ8TBG9 265 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 ST7LQ8TDW4 575 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 SLAMF6Q96DU3 332 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 HRASLS5Q96KN8 279 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 MBOAT4Q96T53 435 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 OR2J1Q9GZK6 312 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 TOR3AQ9H497 397 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 DDX28Q9NUL7 540 aaKnown RBP11.62□□□□□ -0.55
COL1A1-208ENST00000494334 H2AFY2Q9P0M6 372 aaPredicted RBP11.62□□□□□ -0.55
COL1A1-208ENST00000494334 FBXO9Q9UK97 447 aaPredicted RBP11.62□□□□□ -0.55
COL1A1-208ENST00000494334 STARD10Q9Y365 291 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 TEX15Q9BXT5 2789 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 AKAP9Q99996 3911 aa11.62□□□□□ -0.55
COL1A1-208ENST00000494334 MYO9AB2RTY4 2548 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 ARID1AO14497 2285 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 ADRA2AP08913 450 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 ACSM4P0C7M7 580 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 MPV17P39210 176 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 NAA10P41227 235 aaPredicted RBP11.61□□□□□ -0.55
COL1A1-208ENST00000494334 ALDH3B1P43353 468 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 RGS6P49758 472 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 PPOXP50336 477 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 SELENOVP59797 346 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 CDC42P60953 191 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 TRIP10Q15642 601 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 LRRC36Q1X8D7 754 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 MBNL2Q5VZF2 373 aaKnown RBP11.61□□□□□ -0.55
COL1A1-208ENST00000494334 LPCAT4Q643R3 524 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 NAA40Q86UY6 237 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 ZCCHC24Q8N2G6 241 aaKnown RBP11.61□□□□□ -0.55
COL1A1-208ENST00000494334 OR8J1Q8NGP2 316 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 KLF14Q8TD94 323 aaPredicted RBP11.61□□□□□ -0.55
COL1A1-208ENST00000494334 UBE2FQ969M7 185 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 SORCS2Q96PQ0 1159 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 AMELYQ99218 206 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 VRK1Q99986 396 aaPredicted RBP11.61□□□□□ -0.55
COL1A1-208ENST00000494334 ABHD6Q9BV23 337 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 POFUT1Q9H488 388 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 CENPMQ9NSP4 180 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 TAAR3PQ9P1P4 343 aa11.61□□□□□ -0.55
COL1A1-208ENST00000494334 A0A1W2PPW3 197 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 SLC22A31A6NKX4 558 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 J3QW42 95 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 M0R135 149 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 DLGAP1O14490 977 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 IGHV3-13P01766 116 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 TUBG1P23258 451 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 GCH1P30793 250 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 OTX1P32242 354 aaPredicted RBP11.6□□□□□ -0.55
COL1A1-208ENST00000494334 HCCSP53701 268 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 TPTEP56180 551 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 KLF3P57682 345 aaPredicted RBP11.6□□□□□ -0.55
COL1A1-208ENST00000494334 MAD2L1BPQ15013 274 aaPredicted RBP11.6□□□□□ -0.55
COL1A1-208ENST00000494334 TMEM255AQ5JRV8 349 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 LCN1P1Q5VSP4 162 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 COLCA1Q6ZS62 124 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 SPATC1Q76KD6 591 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 GALNT4Q8N4A0 578 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 OTOSQ8NHW6 89 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 FAM81AQ8TBF8 368 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 RNF133Q8WVZ7 376 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 TRUB1Q8WWH5 349 aaKnown RBP11.6□□□□□ -0.55
COL1A1-208ENST00000494334 IPCEF1Q8WWN9 437 aaPredicted RBP11.6□□□□□ -0.55
COL1A1-208ENST00000494334 APOBEC3DQ96AK3 386 aaPredicted RBP11.6□□□□□ -0.55
COL1A1-208ENST00000494334 ZNF799Q96GE5 643 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 KCNJ15Q99712 375 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 COPS4Q9BT78 406 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 C1QTNF5Q9BXJ0 243 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 DCLRE1BQ9H816 532 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 BARX1Q9HBU1 254 aaPredicted RBP11.6□□□□□ -0.55
COL1A1-208ENST00000494334 DYNLRB1Q9NP97 96 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 TUBG2Q9NRH3 451 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 SLCO1C1Q9NYB5 712 aa11.6□□□□□ -0.55
COL1A1-208ENST00000494334 LOC100130705A0A1B0GUX0 176 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms