RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 DVL1P1P54792 670 aaPredicted RBP4.39□□□□□ -1.71
PTCD3-219ENST00000494323 AQP5P55064 265 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 CLDN17P56750 224 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 KRTAP10-11P60412 298 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 HPCAP84074 193 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 IL1RL1Q01638 556 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 ROR2Q01974 943 aaKnown RBP4.39□□□□□ -1.71
PTCD3-219ENST00000494323 MRPL2Q5T653 305 aaKnown RBP4.39□□□□□ -1.71
PTCD3-219ENST00000494323 SAXO2Q658L1 398 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 KRT80Q6KB66 452 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 ZNF621Q6ZSS3 439 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 Q6ZTK2 550 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 MDP1Q86V88 176 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 GLCCI1Q86VQ1 547 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 LRP11Q86VZ4 500 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 VRK2Q86Y07 508 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 CLIP4Q8N3C7 705 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 ZBTB8BQ8NAP8 495 aaPredicted RBP4.39□□□□□ -1.71
PTCD3-219ENST00000494323 NUP37Q8NFH4 326 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 OR4F15Q8NGB8 312 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 OR8J2Q8NGG1 315 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 CLDND2Q8NHS1 167 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 KIF18AQ8NI77 898 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 PNPT1Q8TCS8 783 aaKnown RBP4.39□□□□□ -1.71
PTCD3-219ENST00000494323 TCP10LQ8TDR4 215 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 TMEM186Q96B77 213 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 NEURL3Q96EH8 262 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 ANKRD27Q96NW4 1050 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 TRNT1Q96Q11 434 aaKnown RBP4.39□□□□□ -1.71
PTCD3-219ENST00000494323 SLC35A5Q9BS91 424 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 PCGF1Q9BSM1 259 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 TAPBPLQ9BX59 468 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 DPY30Q9C005 99 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 FAM234AQ9H0X4 552 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 SLC38A1Q9H2H9 487 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 RABEP2Q9H5N1 569 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 EXOSC3Q9NQT5 275 aaKnown RBP4.39□□□□□ -1.71
PTCD3-219ENST00000494323 POLE3Q9NRF9 147 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 CRNNQ9UBG3 495 aaPredicted RBP4.39□□□□□ -1.71
PTCD3-219ENST00000494323 SEC14L4Q9UDX3 406 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 MARCOQ9UEW3 520 aaPredicted RBP4.39□□□□□ -1.71
PTCD3-219ENST00000494323 FZR1Q9UM11 496 aa4.39□□□□□ -1.71
PTCD3-219ENST00000494323 LOC105371242A0A075B767 164 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 ARPC4-TTLL3A0A0A6YYG9 625 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 TMEM89A2RUT3 159 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 A8MVM7 634 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 SLCO1B7G3V0H7 640 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 H3BNX3 289 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 M0R3G1 203 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 TIMM23O14925 209 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 PPIHO43447 177 aaKnown RBP4.38□□□□□ -1.71
PTCD3-219ENST00000494323 SPRY3O43610 288 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 PDE5AO76074 875 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 IGKV3-15P01624 115 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 HLA-HP01893 362 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 DBIP07108 87 aaKnown RBP4.38□□□□□ -1.71
PTCD3-219ENST00000494323 GUSBP08236 651 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 TFPTP0C1Z6 253 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 CD79AP11912 226 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 UQCRBP14927 111 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 ZNF43P17038 809 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 ADRA2CP18825 462 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 NCF2P19878 526 aaPredicted RBP4.38□□□□□ -1.71
PTCD3-219ENST00000494323 CBLP22681 906 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 S100A3P33764 101 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 ARR3P36575 388 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 CDKN2CP42773 168 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 GPR6P46095 362 aaPredicted RBP4.38□□□□□ -1.71
PTCD3-219ENST00000494323 RPS5P46782 204 aaKnown RBP4.38□□□□□ -1.71
PTCD3-219ENST00000494323 RFX2P48378 723 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 KHKP50053 298 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 COPZ1P61923 177 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 HOXC5Q00444 222 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 MAD2L1Q13257 205 aaPredicted RBP4.38□□□□□ -1.71
PTCD3-219ENST00000494323 SNTB2Q13425 540 aaKnown RBP4.38□□□□□ -1.71
PTCD3-219ENST00000494323 CASP8Q14790 479 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 MAD2L1BPQ15013 274 aaPredicted RBP4.38□□□□□ -1.71
PTCD3-219ENST00000494323 MAPK11Q15759 364 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 CHI3L2Q15782 390 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 CEACAM16Q2WEN9 425 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 ALKBH6Q3KRA9 238 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 C9orf152Q5JTZ5 239 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 SPANXN4Q5MJ08 99 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 ELFN2Q5R3F8 820 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 PHYHD1Q5SRE7 291 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 ANXA8L1Q5VT79 327 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 C1orf140Q5VVS0 124 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 PRAMEF8Q5VWM4 474 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 PRAMEF7Q5VXH5 474 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 CARD17Q5XLA6 110 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 WBP2NLQ6ICG8 309 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 SHQ1Q6PI26 577 aaKnown RBP4.38□□□□□ -1.71
PTCD3-219ENST00000494323 ZNF836Q6ZNA1 936 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 LRRC74BQ6ZQY2 392 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 Q6ZSV7 163 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 ZNF367Q7RTV3 350 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 ZNF781Q8N8C0 355 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 NEXN-AS1Q8NBZ9 246 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 OR52P1PQ8NH57 321 aa4.38□□□□□ -1.71
PTCD3-219ENST00000494323 SGMS2Q8NHU3 365 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms