RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 CCDC92Q53HC0 331 aaPredicted RBP9.99□□□□□ -0.81
CTSA-209ENST00000493522 SLC35D3Q5M8T2 416 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 ELFN2Q5R3F8 820 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 AGAP6Q5VW22 663 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 MUC15Q8N387 334 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 SLC7A6Q92536 515 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 PTP4A1Q93096 173 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 POM121L2Q96KW2 1035 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 PITX2Q99697 317 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 CXorf56Q9H5V9 222 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 ZNF442Q9H7R0 627 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 SMPD3Q9NY59 655 aaPredicted RBP9.99□□□□□ -0.81
CTSA-209ENST00000493522 H2AFY2Q9P0M6 372 aaPredicted RBP9.99□□□□□ -0.81
CTSA-209ENST00000493522 EIF3KQ9UBQ5 218 aaKnown RBP9.99□□□□□ -0.81
CTSA-209ENST00000493522 CYB5R1Q9UHQ9 305 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 GMPPBQ9Y5P6 360 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 MXRA5Q9NR99 2828 aa9.99□□□□□ -0.81
CTSA-209ENST00000493522 USF3Q68DE3 2245 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 CUBNO60494 3623 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 CCDC182A6NF36 153 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 OR6C6A6NF89 314 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 ZNF593O00488 134 aaPredicted RBP9.98□□□□□ -0.81
CTSA-209ENST00000493522 ABHD16AO95870 558 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 MRPL3P09001 348 aaKnown RBP9.98□□□□□ -0.81
CTSA-209ENST00000493522 OR4A8P0C604 315 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 DANCRP0C864 163 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 APOBEC3AP31941 199 aaPredicted RBP9.98□□□□□ -0.81
CTSA-209ENST00000493522 GLRXP35754 106 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 WNT5AP41221 380 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 HIST1H3AP68431 136 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 EIF2B1Q14232 305 aaKnown RBP9.98□□□□□ -0.81
CTSA-209ENST00000493522 HIST2H3PS2Q5TEC6 136 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 NXNL2Q5VZ03 156 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 RGS7BPQ6MZT1 257 aaPredicted RBP9.98□□□□□ -0.81
CTSA-209ENST00000493522 RFPL4BQ6ZWI9 263 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 HIST2H3AQ71DI3 136 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 DCXRQ7Z4W1 244 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 BCDIN3DQ7Z5W3 292 aaKnown RBP9.98□□□□□ -0.81
CTSA-209ENST00000493522 GID4Q8IVV7 300 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 PACRGLQ8N7B6 248 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 ZNF555Q8NEP9 628 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 ABHD4Q8TB40 342 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 MAP6Q96JE9 813 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 HRASLS5Q96KN8 279 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 COQ7Q99807 217 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 ATF6BQ99941 703 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 TRAF4Q9BUZ4 470 aaPredicted RBP9.98□□□□□ -0.81
CTSA-209ENST00000493522 BCL2L14Q9BZR8 327 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 VCXQ9H320 206 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 MARCH7Q9H992 704 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 RNPEPL1Q9HAU8 725 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 C8orf4Q9NR00 106 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 CBLN4Q9NTU7 201 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 DNAJC27Q9NZQ0 273 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 NKX1-2Q9UD57 310 aaPredicted RBP9.98□□□□□ -0.81
CTSA-209ENST00000493522 ATPIF1Q9UII2 106 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 CMAHPQ9Y471 501 aa9.98□□□□□ -0.81
CTSA-209ENST00000493522 SLC22A31A6NKX4 558 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 VSTM5A8MXK1 200 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 CASQ2O14958 399 aaPredicted RBP9.97□□□□□ -0.81
CTSA-209ENST00000493522 DBHP09172 617 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 PAX1P15863 534 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 SERPINF1P36955 418 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 CDKN1AP38936 164 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 RAD52P43351 418 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 ERVS71-1P61550 626 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 SNRPD2P62316 118 aaKnown RBP9.97□□□□□ -0.81
CTSA-209ENST00000493522 SLC34A1Q06495 639 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 TAF13Q15543 124 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 ADIPOQQ15848 244 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 TEX30Q5JUR7 227 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 OGFRL1Q5TC84 451 aaPredicted RBP9.97□□□□□ -0.81
CTSA-209ENST00000493522 ARL9Q6T311 187 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 UNQ6126/PRO20091Q6UXV3 157 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 SPATC1Q76KD6 591 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 MEPCEQ7L2J0 689 aaKnown RBP9.97□□□□□ -0.81
CTSA-209ENST00000493522 SHFQ7M4L6 423 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 DPY19L4Q7Z388 723 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 DTX2Q86UW9 622 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 TIGD4Q8IY51 512 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 ZNF101Q8IZC7 436 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 OR8J1Q8NGP2 316 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 OR1J1Q8NGS3 322 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 SLAMF6Q96DU3 332 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 C4orf45Q96LM5 186 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 RDH12Q96NR8 316 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 CNN2Q99439 309 aaKnown RBP9.97□□□□□ -0.81
CTSA-209ENST00000493522 COPS4Q9BT78 406 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 PLK3Q9H4B4 646 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 ELOVL3Q9HB03 270 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 PNRC2Q9NPJ4 139 aaKnown RBP9.97□□□□□ -0.81
CTSA-209ENST00000493522 CENPMQ9NSP4 180 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 FZR1Q9UM11 496 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 GRIP1Q9Y3R0 1128 aa9.97□□□□□ -0.81
CTSA-209ENST00000493522 A0A1W2PPW3 197 aa9.96□□□□□ -0.82
CTSA-209ENST00000493522 ZNF878C9JN71 531 aa9.96□□□□□ -0.82
CTSA-209ENST00000493522 UCP2P55851 309 aa9.96□□□□□ -0.82
CTSA-209ENST00000493522 PPP1CBP62140 327 aa9.96□□□□□ -0.82
CTSA-209ENST00000493522 ECH1Q13011 328 aa9.96□□□□□ -0.82
CTSA-209ENST00000493522 PCK2Q16822 640 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms