RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 FCMRO60667 390 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 PSMG1O95456 288 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 ANGPTL1O95841 491 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 KRT6AP02538 564 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 KRT6BP04259 564 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 ATP1B1P05026 303 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 HMGN2P05204 90 aaKnown RBP2.43□□□□□ -2.02
PTCD3-218ENST00000493430 GSTA1P08263 222 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 RBP1P09455 135 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 GKN3PP0CG01 181 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 ZNF708P17019 499 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 TAC1P20366 129 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 IL10P22301 178 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 PPICP45877 212 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 KRT6CP48668 564 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 SLC9A3P48764 834 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 ASCL1P50553 236 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 SMSP52788 366 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 SKP1P63208 163 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 HBA1P69905 142 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 CD300CQ08708 224 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 BST1Q10588 318 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 BNIP2Q12982 314 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 SELPLGQ14242 412 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 PON3Q15166 354 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 MAPK11Q15759 364 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 HYAL4Q2M3T9 481 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 PLPPR5Q32ZL2 321 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 UGT3A2Q3SY77 523 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 XKR7Q5GH72 579 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 CFAP157Q5JU67 520 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 SLC35D3Q5M8T2 416 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 SPANXN4Q5MJ08 99 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 PDZK1Q5T2W1 519 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 C6orf163Q5TEZ5 329 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 IL23RQ5VWK5 629 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 OTPQ5XKR4 325 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 FAM166AQ6J272 317 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 MFSD12Q6NUT3 480 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 XKRXQ6PP77 449 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 B3GLCTQ6Y288 498 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 TIFABQ6ZNK6 161 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 GDPGP1Q6ZNW5 385 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 IL17RELQ6ZVW7 336 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 TRMT10CQ7L0Y3 403 aaKnown RBP2.43□□□□□ -2.02
PTCD3-218ENST00000493430 P4HA3Q7Z4N8 544 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 CCDC91Q7Z6B0 441 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 SLC25A42Q86VD7 318 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 CATSPERDQ86XM0 798 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 PLCZ1Q86YW0 608 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 GRAMD2AQ8IUY3 354 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 LINC00346Q8IVM7 164 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 IFT20Q8IY31 132 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 COX18Q8N8Q8 333 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 ANKFN1Q8N957 763 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 FADS6Q8N9I5 356 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 MNS1Q8NEH6 495 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 Q8NFD4 153 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 OR4K17Q8NGC6 315 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 OR5L2Q8NGL0 311 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 C11orf45Q8TAV5 145 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 FAM110BQ8TC76 370 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 ZNF675Q8TD23 568 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 RNF138Q8WVD3 245 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 UBE2E3Q969T4 207 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 FAM162AQ96A26 154 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 VPS33AQ96AX1 596 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 PPCDCQ96CD2 204 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 STARD4Q96DR4 205 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 FCRL1Q96LA6 429 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 C1orf147Q96MC9 270 aaPredicted RBP2.43□□□□□ -2.02
PTCD3-218ENST00000493430 WFIKKN1Q96NZ8 548 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 COL21A1Q96P44 957 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 BTBD9Q96Q07 612 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 OR7D2Q96RA2 312 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 OR52B2Q96RD2 323 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 ABHD1Q96SE0 405 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 PAIP2Q9BPZ3 127 aaKnown RBP2.43□□□□□ -2.02
PTCD3-218ENST00000493430 WFDC6Q9BQY6 131 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 RBM24Q9BX46 236 aaKnown RBP2.43□□□□□ -2.02
PTCD3-218ENST00000493430 C1QTNF6Q9BXI9 259 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 KLHL4Q9C0H6 718 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 IKZF5Q9H5V7 419 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 CALHM2Q9HA72 323 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 WDR41Q9HAD4 459 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 GPN1Q9HCN4 374 aaPredicted RBP2.43□□□□□ -2.02
PTCD3-218ENST00000493430 KCNJ16Q9NPI9 418 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 RRAGDQ9NQL2 400 aaPredicted RBP2.43□□□□□ -2.02
PTCD3-218ENST00000493430 CTPS2Q9NRF8 586 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 ZCCHC3Q9NUD5 404 aaKnown RBP2.43□□□□□ -2.02
PTCD3-218ENST00000493430 DDX18Q9NVP1 670 aaKnown RBP2.43□□□□□ -2.02
PTCD3-218ENST00000493430 STUB1Q9UNE7 303 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 SNX6Q9UNH7 406 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 WIPI2Q9Y4P8 454 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 ZNF780BQ9Y6R6 833 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 CUBNO60494 3623 aa2.43□□□□□ -2.02
PTCD3-218ENST00000493430 VPS13CQ709C8 3753 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 RNF103-CHMP3A0A140T963 221 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 TMEM120BA0PK00 339 aa2.42□□□□□ -2.02
PTCD3-218ENST00000493430 GOLGA6L10A6NI86 522 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms