RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 SAMD8Q96LT4 415 aa17.4■□□□□ 0.38
CLTA-208ENST00000493185 NMNAT3Q96T66 252 aa17.4■□□□□ 0.38
CLTA-208ENST00000493185 COQ7Q99807 217 aa17.4■□□□□ 0.38
CLTA-208ENST00000493185 SRA1Q9HD15 236 aaKnown RBP17.4■□□□□ 0.38
CLTA-208ENST00000493185 IL1RAPQ9NPH3 570 aa17.4■□□□□ 0.38
CLTA-208ENST00000493185 B9D1Q9UPM9 204 aa17.4■□□□□ 0.38
CLTA-208ENST00000493185 NPTNQ9Y639 398 aa17.4■□□□□ 0.38
CLTA-208ENST00000493185 IGLV1-36A0A0B4J1U3 117 aa17.39■□□□□ 0.37
CLTA-208ENST00000493185 J3QLI3 93 aa17.39■□□□□ 0.37
CLTA-208ENST00000493185 DCTN6O00399 190 aa17.39■□□□□ 0.37
CLTA-208ENST00000493185 GPANK1O95872 356 aa17.39■□□□□ 0.37
CLTA-208ENST00000493185 HIST1H1CP16403 213 aaKnown RBP17.39■□□□□ 0.37
CLTA-208ENST00000493185 MEP1BQ16820 701 aa17.39■□□□□ 0.37
CLTA-208ENST00000493185 DCAF12L2Q5VW00 463 aa17.39■□□□□ 0.37
CLTA-208ENST00000493185 Q6ZR03 302 aa17.39■□□□□ 0.37
CLTA-208ENST00000493185 ZDHHC21Q8IVQ6 265 aa17.39■□□□□ 0.37
CLTA-208ENST00000493185 DEFB107AQ8IZN7 70 aa17.39■□□□□ 0.37
CLTA-208ENST00000493185 OR6V1Q8N148 313 aa17.39■□□□□ 0.37
CLTA-208ENST00000493185 OR4K13Q8NH42 304 aa17.39■□□□□ 0.37
CLTA-208ENST00000493185 GNPDA2Q8TDQ7 276 aa17.39■□□□□ 0.37
CLTA-208ENST00000493185 APOBEC3DQ96AK3 386 aaPredicted RBP17.39■□□□□ 0.37
CLTA-208ENST00000493185 TMEM106BQ9NUM4 274 aa17.39■□□□□ 0.37
CLTA-208ENST00000493185 IL19Q9UHD0 177 aa17.39■□□□□ 0.37
CLTA-208ENST00000493185 PCDHB10Q9UN67 800 aa17.39■□□□□ 0.37
CLTA-208ENST00000493185 LHFPL6Q9Y693 200 aa17.39■□□□□ 0.37
CLTA-208ENST00000493185 LOC105371242A0A075B767 164 aa17.38■□□□□ 0.37
CLTA-208ENST00000493185 IDH3BO43837 385 aa17.38■□□□□ 0.37
CLTA-208ENST00000493185 SBK2P0C263 348 aa17.38■□□□□ 0.37
CLTA-208ENST00000493185 GATA3P23771 443 aa17.38■□□□□ 0.37
CLTA-208ENST00000493185 GSSP48637 474 aa17.38■□□□□ 0.37
CLTA-208ENST00000493185 GYS2P54840 703 aa17.38■□□□□ 0.37
CLTA-208ENST00000493185 COX10Q12887 443 aa17.38■□□□□ 0.37
CLTA-208ENST00000493185 CORO6Q6QEF8 472 aa17.38■□□□□ 0.37
CLTA-208ENST00000493185 PIGWQ7Z7B1 504 aa17.38■□□□□ 0.37
CLTA-208ENST00000493185 ZNF418Q8TF45 676 aaPredicted RBP17.38■□□□□ 0.37
CLTA-208ENST00000493185 RPRD1BQ9NQG5 326 aaKnown RBP17.38■□□□□ 0.37
CLTA-208ENST00000493185 PTTG3PQ9NZH4 202 aa17.38■□□□□ 0.37
CLTA-208ENST00000493185 ARHGAP32A7KAX9 2087 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 KRT36O76013 467 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 IGHV2-70P01814 119 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 MNAT1P51948 309 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 HIST1H3AP68431 136 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 TSPAN31Q12999 210 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 HLXQ14774 488 aaPredicted RBP17.37■□□□□ 0.37
CLTA-208ENST00000493185 SLC36A3Q495N2 470 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 HIST2H3PS2Q5TEC6 136 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 FBXW12Q6X9E4 464 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 ZNF620Q6ZNG0 422 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 HIST2H3AQ71DI3 136 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 OR5AS1Q8N127 324 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 SPICQ8N5J4 248 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 ZNF283Q8N7M2 679 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 ATG16L2Q8NAA4 619 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 SLC26A10Q8NG04 563 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 ITLN1Q8WWA0 313 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 OR2V2Q96R30 315 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 CDADC1Q9BWV3 514 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 TMPRSS13Q9BYE2 586 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 DCAF16Q9NXF7 216 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 PPP1R3CQ9UQK1 317 aa17.37■□□□□ 0.37
CLTA-208ENST00000493185 FOXH1O75593 365 aa17.36■□□□□ 0.37
CLTA-208ENST00000493185 HLA-DQA2P01906 255 aa17.36■□□□□ 0.37
CLTA-208ENST00000493185 EPHA1P21709 976 aa17.36■□□□□ 0.37
CLTA-208ENST00000493185 ERFP50548 548 aa17.36■□□□□ 0.37
CLTA-208ENST00000493185 LCN2P80188 198 aa17.36■□□□□ 0.37
CLTA-208ENST00000493185 SLC27A4Q6P1M0 643 aa17.36■□□□□ 0.37
CLTA-208ENST00000493185 PGBD2Q6P3X8 592 aa17.36■□□□□ 0.37
CLTA-208ENST00000493185 C1orf229Q6ZS94 237 aaPredicted RBP17.36■□□□□ 0.37
CLTA-208ENST00000493185 C1QL2Q7Z5L3 287 aa17.36■□□□□ 0.37
CLTA-208ENST00000493185 ZBTB46Q86UZ6 589 aa17.36■□□□□ 0.37
CLTA-208ENST00000493185 KLHL36Q8N4N3 616 aa17.36■□□□□ 0.37
CLTA-208ENST00000493185 SDR9C7Q8NEX9 313 aa17.36■□□□□ 0.37
CLTA-208ENST00000493185 OR52L1Q8NGH7 329 aa17.36■□□□□ 0.37
CLTA-208ENST00000493185 OR52E2Q8NGJ4 325 aa17.36■□□□□ 0.37
CLTA-208ENST00000493185 OR2AJ1Q8NGZ0 328 aa17.36■□□□□ 0.37
CLTA-208ENST00000493185 OR13G1Q8NGZ3 307 aa17.36■□□□□ 0.37
CLTA-208ENST00000493185 ZNF582Q96NG8 517 aaPredicted RBP17.36■□□□□ 0.37
CLTA-208ENST00000493185 PITX2Q99697 317 aa17.36■□□□□ 0.37
CLTA-208ENST00000493185 HAX1O00165 279 aa17.35■□□□□ 0.37
CLTA-208ENST00000493185 VENTXO95231 258 aa17.35■□□□□ 0.37
CLTA-208ENST00000493185 AVPP01185 164 aa17.35■□□□□ 0.37
CLTA-208ENST00000493185 BTG1P62324 171 aa17.35■□□□□ 0.37
CLTA-208ENST00000493185 ECH1Q13011 328 aa17.35■□□□□ 0.37
CLTA-208ENST00000493185 TMEM155Q4W5P6 130 aa17.35■□□□□ 0.37
CLTA-208ENST00000493185 OR2T2Q6IF00 324 aa17.35■□□□□ 0.37
CLTA-208ENST00000493185 SLC18B1Q6NT16 456 aa17.35■□□□□ 0.37
CLTA-208ENST00000493185 RPL13AP3Q6NVV1 102 aa17.35■□□□□ 0.37
CLTA-208ENST00000493185 LINC00346Q8IVM7 164 aa17.35■□□□□ 0.37
CLTA-208ENST00000493185 LINC00471Q8N535 108 aa17.35■□□□□ 0.37
CLTA-208ENST00000493185 OR8G5Q8NG78 346 aa17.35■□□□□ 0.37
CLTA-208ENST00000493185 NANPQ8TBE9 248 aa17.35■□□□□ 0.37
CLTA-208ENST00000493185 ZFAND2BQ8WV99 257 aa17.35■□□□□ 0.37
CLTA-208ENST00000493185 C7orf69Q9H7B7 122 aa17.35■□□□□ 0.37
CLTA-208ENST00000493185 OR6C68A6NDL8 312 aa17.34■□□□□ 0.37
CLTA-208ENST00000493185 IFNL4K9M1U5 179 aa17.34■□□□□ 0.37
CLTA-208ENST00000493185 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.34■□□□□ 0.37
CLTA-208ENST00000493185 HNRNPA0Q13151 305 aaKnown RBP17.34■□□□□ 0.37
CLTA-208ENST00000493185 CLEC12AQ5QGZ9 265 aa17.34■□□□□ 0.37
CLTA-208ENST00000493185 SLC35F1Q5T1Q4 408 aa17.34■□□□□ 0.37
CLTA-208ENST00000493185 CYP2R1Q6VVX0 501 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms