RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 THBDP07204 575 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 RPSAP08865 295 aaKnown RBP11.67□□□□□ -0.54
MSH6-208ENST00000493177 MMP7P09237 267 aaPredicted RBP11.67□□□□□ -0.54
MSH6-208ENST00000493177 CD99P14209 185 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 ALOX5APP20292 161 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 C21orf33P30042 268 aaPredicted RBP11.67□□□□□ -0.54
MSH6-208ENST00000493177 PSG4Q00888 419 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 MVKQ03426 396 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 ZNF85Q03923 595 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 PLP2Q04941 152 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 PPA1Q15181 289 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 CCDC92Q53HC0 331 aaPredicted RBP11.67□□□□□ -0.54
MSH6-208ENST00000493177 PABPC1L2AQ5JQF8 200 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 ZNF774Q6NX45 483 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 KCTD18Q6PI47 426 aaPredicted RBP11.67□□□□□ -0.54
MSH6-208ENST00000493177 ZNF322Q6U7Q0 402 aaPredicted RBP11.67□□□□□ -0.54
MSH6-208ENST00000493177 ZNF704Q6ZNC4 412 aaPredicted RBP11.67□□□□□ -0.54
MSH6-208ENST00000493177 SSX6Q7RTT6 188 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 KRT77Q7Z794 578 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 P2RY8Q86VZ1 359 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 ALDH16A1Q8IZ83 802 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 HSD17B8Q92506 261 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 PIGTQ969N2 578 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 MBD6Q96DN6 1003 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 MAP6Q96JE9 813 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 AMELYQ99218 206 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 C1QTNF6Q9BXI9 259 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 ESRP2Q9H6T0 727 aaKnown RBP11.67□□□□□ -0.54
MSH6-208ENST00000493177 NOX3Q9HBY0 568 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 BEX4Q9NWD9 120 aaPredicted RBP11.67□□□□□ -0.54
MSH6-208ENST00000493177 ERVK13-1Q9NX77 482 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 DSCAMO60469 2012 aa11.67□□□□□ -0.54
MSH6-208ENST00000493177 IQCMA0A1B0GVH7 501 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 A0A1W2PPR1 153 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 ZNF878C9JN71 531 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 MAGEB4O15481 346 aaPredicted RBP11.66□□□□□ -0.54
MSH6-208ENST00000493177 KRT8P05787 483 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 ADRA2AP08913 450 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 H2BFMP0C1H6 154 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 HTR5AP47898 357 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 ETV1P50549 477 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 GALEQ14376 348 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 RAB39AQ14964 217 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 RAB35Q15286 201 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 TAB1Q15750 504 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 TP53I3Q53FA7 332 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 ELFN2Q5R3F8 820 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 LRRN1Q6UXK5 716 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 C20orf204Q6ZNR8 217 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 C22orf34Q6ZV56 151 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 VASH1Q7L8A9 365 aaPredicted RBP11.66□□□□□ -0.54
MSH6-208ENST00000493177 PRSS48Q7RTY5 328 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 FAM220AQ7Z4H9 259 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.66□□□□□ -0.54
MSH6-208ENST00000493177 KLHL36Q8N4N3 616 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 YIPF7Q8N8F6 280 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 ST7LQ8TDW4 575 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 BOD1Q96IK1 185 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 HS3ST6Q96QI5 342 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 MROQ9BYG7 248 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 WNT5BQ9H1J7 359 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 CLEC2DQ9UHP7 191 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 ERGIC3Q9Y282 383 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 SLC25A15Q9Y619 301 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 MYO9AB2RTY4 2548 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 MED13LQ71F56 2210 aa11.66□□□□□ -0.54
MSH6-208ENST00000493177 DCHS2Q6V1P9 2916 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 J3QLW9 94 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 CD3EP07766 207 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 CBR1P16152 277 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 ZNF19P17023 458 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 CD53P19397 219 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 HSD11B1P28845 292 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 APLNRP35414 380 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 MAP2K4P45985 399 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 ZNF83P51522 516 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 IDH3GP51553 393 aaPredicted RBP11.65□□□□□ -0.54
MSH6-208ENST00000493177 ACTA2P62736 377 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 ACTG2P63267 376 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 HIST1H3AP68431 136 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 EGR3Q06889 387 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 HIST2H3PS2Q5TEC6 136 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 ZNF773Q6PK81 442 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 TMPRSS11AQ6ZMR5 421 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 PLEKHG7Q6ZR37 379 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 HIST2H3AQ71DI3 136 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 TGIF2LYQ8IUE0 185 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 SVOPQ8N4V2 548 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 TSPAN14Q8NG11 270 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 OR1F12Q8NHA8 337 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 RNF133Q8WVZ7 376 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 OR8B4Q96RC9 309 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 ATF6BQ99941 703 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 JAM3Q9BX67 310 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 HDHD2Q9H0R4 259 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 CXXC4Q9H2H0 198 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 ZNF696Q9H7X3 374 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 ELOVL3Q9HB03 270 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 B3GNT2Q9NY97 397 aa11.65□□□□□ -0.54
MSH6-208ENST00000493177 SLCO1C1Q9NYB5 712 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms