RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 RFPL4BQ6ZWI9 263 aa12□□□□□ -0.49
CCM2-217ENST00000492883 SPATC1Q76KD6 591 aa12□□□□□ -0.49
CCM2-217ENST00000492883 MEPCEQ7L2J0 689 aaKnown RBP12□□□□□ -0.49
CCM2-217ENST00000492883 GALNT4Q8N4A0 578 aa12□□□□□ -0.49
CCM2-217ENST00000492883 OR5L1Q8NGL2 311 aa12□□□□□ -0.49
CCM2-217ENST00000492883 THEM6Q8WUY1 208 aa12□□□□□ -0.49
CCM2-217ENST00000492883 IPCEF1Q8WWN9 437 aaPredicted RBP12□□□□□ -0.49
CCM2-217ENST00000492883 SPTSSAQ969W0 71 aa12□□□□□ -0.49
CCM2-217ENST00000492883 SLAMF6Q96DU3 332 aa12□□□□□ -0.49
CCM2-217ENST00000492883 COG8Q96MW5 612 aa12□□□□□ -0.49
CCM2-217ENST00000492883 COPS4Q9BT78 406 aa12□□□□□ -0.49
CCM2-217ENST00000492883 OR2J1Q9GZK6 312 aa12□□□□□ -0.49
CCM2-217ENST00000492883 RAB1BQ9H0U4 201 aa12□□□□□ -0.49
CCM2-217ENST00000492883 MS4A5Q9H3V2 200 aa12□□□□□ -0.49
CCM2-217ENST00000492883 MARCH7Q9H992 704 aa12□□□□□ -0.49
CCM2-217ENST00000492883 BARX1Q9HBU1 254 aaPredicted RBP12□□□□□ -0.49
CCM2-217ENST00000492883 TAAR3PQ9P1P4 343 aa12□□□□□ -0.49
CCM2-217ENST00000492883 GPR160Q9UJ42 338 aa12□□□□□ -0.49
CCM2-217ENST00000492883 SLC22A31A6NKX4 558 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 M0R233 179 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 SSX4O60224 188 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 ICMTO60725 284 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 CLPTM1O96005 669 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 IGHV4-39P01824 125 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 TUBG1P23258 451 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 ALDH3B1P43353 468 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 SLC15A1P46059 708 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 SLC6A9P48067 706 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 RGS6P49758 472 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 PPOXP50336 477 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 NUDT6P53370 316 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 MAD2L1BPQ15013 274 aaPredicted RBP11.99□□□□□ -0.49
CCM2-217ENST00000492883 NKPD1Q17RQ9 610 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 RSPO1Q2MKA7 263 aaPredicted RBP11.99□□□□□ -0.49
CCM2-217ENST00000492883 ALKBH6Q3KRA9 238 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 AADACL4Q5VUY2 407 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 GID4Q8IVV7 300 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 ZNF454Q8N9F8 522 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 OR10S1Q8NGN2 331 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 OR8J1Q8NGP2 316 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 FAM81AQ8TBF8 368 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 KLF14Q8TD94 323 aaPredicted RBP11.99□□□□□ -0.49
CCM2-217ENST00000492883 TRUB1Q8WWH5 349 aaKnown RBP11.99□□□□□ -0.49
CCM2-217ENST00000492883 APOBEC3DQ96AK3 386 aaPredicted RBP11.99□□□□□ -0.49
CCM2-217ENST00000492883 MARS2Q96GW9 593 aaKnown RBP11.99□□□□□ -0.49
CCM2-217ENST00000492883 HRASLS5Q96KN8 279 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 ABHD6Q9BV23 337 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 TUBG2Q9NRH3 451 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 DDX28Q9NUL7 540 aaKnown RBP11.99□□□□□ -0.49
CCM2-217ENST00000492883 SLCO1C1Q9NYB5 712 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 MYEF2Q9P2K5 600 aaKnown RBP11.99□□□□□ -0.49
CCM2-217ENST00000492883 STARD10Q9Y365 291 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 GMPPBQ9Y5P6 360 aa11.99□□□□□ -0.49
CCM2-217ENST00000492883 CCDC182A6NF36 153 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 ZNF878C9JN71 531 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 H0YHG0 523 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 J3QW42 95 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 M0R135 149 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 LCATP04180 440 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 MRPL3P09001 348 aaKnown RBP11.98□□□□□ -0.49
CCM2-217ENST00000492883 ACSM4P0C7M7 580 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 MPV17P39210 176 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 EFNA4P52798 201 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 KRTAP27-1Q3LI81 207 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 MBNL2Q5VZF2 373 aaKnown RBP11.98□□□□□ -0.49
CCM2-217ENST00000492883 LPCAT4Q643R3 524 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 SPNS3Q6ZMD2 512 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 SLC16A9Q7RTY1 509 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 NAA40Q86UY6 237 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.98□□□□□ -0.49
CCM2-217ENST00000492883 ZCCHC24Q8N2G6 241 aaKnown RBP11.98□□□□□ -0.49
CCM2-217ENST00000492883 WFDC11Q8NEX6 87 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 OTOSQ8NHW6 89 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 ST7LQ8TDW4 575 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 SNX33Q8WV41 574 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 CMBLQ96DG6 245 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 ZNF799Q96GE5 643 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 SORCS2Q96PQ0 1159 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 MBOAT4Q96T53 435 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 KCNJ15Q99712 375 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 DCLRE1BQ9H816 532 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 C8orf4Q9NR00 106 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 LAMP5Q9UJQ1 280 aa11.98□□□□□ -0.49
CCM2-217ENST00000492883 ABCA4P78363 2273 aa11.97□□□□□ -0.49
CCM2-217ENST00000492883 IGLV3-9A0A075B6K5 115 aa11.97□□□□□ -0.49
CCM2-217ENST00000492883 LOC100130705A0A1B0GUX0 176 aa11.97□□□□□ -0.49
CCM2-217ENST00000492883 F12P00748 615 aaPredicted RBP11.97□□□□□ -0.49
CCM2-217ENST00000492883 IGHV3-13P01766 116 aa11.97□□□□□ -0.49
CCM2-217ENST00000492883 MT-ND5P03915 603 aa11.97□□□□□ -0.49
CCM2-217ENST00000492883 LYNP07948 512 aa11.97□□□□□ -0.49
CCM2-217ENST00000492883 H2BFMP0C1H6 154 aa11.97□□□□□ -0.49
CCM2-217ENST00000492883 NAT2P11245 290 aa11.97□□□□□ -0.49
CCM2-217ENST00000492883 HSD11B1P28845 292 aa11.97□□□□□ -0.49
CCM2-217ENST00000492883 PRKXP51817 358 aa11.97□□□□□ -0.49
CCM2-217ENST00000492883 HCCSP53701 268 aa11.97□□□□□ -0.49
CCM2-217ENST00000492883 GRB2P62993 217 aaKnown RBP11.97□□□□□ -0.49
CCM2-217ENST00000492883 CLEC12BQ2HXU8 276 aa11.97□□□□□ -0.49
CCM2-217ENST00000492883 DRAM2Q6UX65 266 aa11.97□□□□□ -0.49
CCM2-217ENST00000492883 ZNF283Q8N7M2 679 aa11.97□□□□□ -0.49
CCM2-217ENST00000492883 ZNF555Q8NEP9 628 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms