RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 LCN2P80188 198 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 SPATS1Q496A3 300 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 CCDC92Q53HC0 331 aaPredicted RBP10.52□□□□□ -0.73
COL6A1-205ENST00000492851 TMEM255AQ5JRV8 349 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 C1orf94Q6P1W5 598 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 TSEN54Q7Z6J9 526 aaKnown RBP10.52□□□□□ -0.73
COL6A1-205ENST00000492851 ATG16L2Q8NAA4 619 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 OR8G5Q8NG78 346 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 DHRS1Q96LJ7 313 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 ERMAPQ96PL5 475 aaPredicted RBP10.52□□□□□ -0.73
COL6A1-205ENST00000492851 GPA33Q99795 319 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 ELAC2Q9BQ52 826 aaKnown RBP10.52□□□□□ -0.73
COL6A1-205ENST00000492851 CDADC1Q9BWV3 514 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 HCAR1Q9BXC0 346 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 NSRP1Q9H0G5 558 aaKnown RBP10.52□□□□□ -0.73
COL6A1-205ENST00000492851 MYLK2Q9H1R3 596 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 PATZ1Q9HBE1 687 aaKnown RBP10.52□□□□□ -0.73
COL6A1-205ENST00000492851 DDX28Q9NUL7 540 aaKnown RBP10.52□□□□□ -0.73
COL6A1-205ENST00000492851 EGFL7Q9UHF1 273 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 MAGEL2Q9UJ55 1249 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 TMCC3Q9ULS5 477 aa10.52□□□□□ -0.73
COL6A1-205ENST00000492851 TMEM89A2RUT3 159 aa10.51□□□□□ -0.73
COL6A1-205ENST00000492851 RER1O15258 196 aa10.51□□□□□ -0.73
COL6A1-205ENST00000492851 FSTL3O95633 263 aa10.51□□□□□ -0.73
COL6A1-205ENST00000492851 NOS3P29474 1203 aa10.51□□□□□ -0.73
COL6A1-205ENST00000492851 MDH2P40926 338 aaKnown RBP10.51□□□□□ -0.73
COL6A1-205ENST00000492851 CDKN2AP42771 156 aaKnown RBP10.51□□□□□ -0.73
COL6A1-205ENST00000492851 SLC6A9P48067 706 aa10.51□□□□□ -0.73
COL6A1-205ENST00000492851 HIST1H3AP68431 136 aa10.51□□□□□ -0.73
COL6A1-205ENST00000492851 SAMD4BQ5PRF9 694 aaKnown RBP10.51□□□□□ -0.73
COL6A1-205ENST00000492851 HIST2H3PS2Q5TEC6 136 aa10.51□□□□□ -0.73
COL6A1-205ENST00000492851 HIST2H3AQ71DI3 136 aa10.51□□□□□ -0.73
COL6A1-205ENST00000492851 JAZF1Q86VZ6 243 aa10.51□□□□□ -0.73
COL6A1-205ENST00000492851 C3orf56Q8N813 242 aa10.51□□□□□ -0.73
COL6A1-205ENST00000492851 OR2AJ1Q8NGZ0 328 aa10.51□□□□□ -0.73
COL6A1-205ENST00000492851 OR52J3Q8NH60 311 aa10.51□□□□□ -0.73
COL6A1-205ENST00000492851 OR2V2Q96R30 315 aa10.51□□□□□ -0.73
COL6A1-205ENST00000492851 MRI1Q9BV20 369 aa10.51□□□□□ -0.73
COL6A1-205ENST00000492851 NDE1Q9NXR1 346 aa10.51□□□□□ -0.73
COL6A1-205ENST00000492851 B9D1Q9UPM9 204 aa10.51□□□□□ -0.73
COL6A1-205ENST00000492851 TRBV4-1A0A0J9YWV2 114 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 TMEM178BH3BS89 294 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 OR10H3O60404 316 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 KRT36O76013 467 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 HSD17B1P14061 328 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 FPR3P25089 353 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 CFPP27918 469 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 COX10Q12887 443 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 MALLQ13021 153 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 SEC23BQ15437 767 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 ZNF181Q2M3W8 571 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 ESCO2Q56NI9 601 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 RPL13AP3Q6NVV1 102 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 Q6ZR03 302 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 PTCHD4Q6ZW05 846 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 CPLX4Q7Z7G2 160 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 C1orf87Q8N0U7 546 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 LINC00471Q8N535 108 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 ITLN1Q8WWA0 313 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 ERGIC1Q969X5 290 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 PLEKHA8Q96JA3 519 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 ZMAT3Q9HA38 289 aaKnown RBP10.5□□□□□ -0.73
COL6A1-205ENST00000492851 SRA1Q9HD15 236 aaKnown RBP10.5□□□□□ -0.73
COL6A1-205ENST00000492851 GCM1Q9NP62 436 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 TMEM100Q9NV29 134 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 OR5V1Q9UGF6 321 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 IL20RAQ9UHF4 553 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 OPN4Q9UHM6 478 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 KCNG2Q9UJ96 466 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 NUP50Q9UKX7 468 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 LRCH1Q9Y2L9 728 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 NOP16Q9Y3C1 178 aaKnown RBP10.5□□□□□ -0.73
COL6A1-205ENST00000492851 AUP1Q9Y679 476 aa10.5□□□□□ -0.73
COL6A1-205ENST00000492851 A8MXK9 166 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 FABP3P05413 133 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 PPIAL4GP0DN37 164 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 IRF2P14316 349 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 ZFP36P26651 326 aaKnown RBP10.49□□□□□ -0.73
COL6A1-205ENST00000492851 SPIBQ01892 262 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 ZNF154Q13106 437 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 ARMCX4Q5H9R4 360 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 LEG1Q6P5S2 330 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 ZBTB46Q86UZ6 589 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 OR6V1Q8N148 313 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 CELF2-AS1Q8N7Q2 184 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 SGMS2Q8NHU3 365 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 FANK1Q8TC84 345 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 GNPDA2Q8TDQ7 276 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 SLC7A6Q92536 515 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 NSMCE2Q96MF7 247 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 SIGLEC11Q96RL6 698 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 PITX2Q99697 317 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 SLC30A2Q9BRI3 323 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 FUZQ9BT04 418 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 IFT27Q9BW83 186 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 SLC22A4Q9H015 551 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 OR52D1Q9H346 318 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 POFUT1Q9H488 388 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 IL1RAPQ9NPH3 570 aa10.49□□□□□ -0.73
COL6A1-205ENST00000492851 PTTG3PQ9NZH4 202 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms