RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 TMEM120BA0PK00 339 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 A8MXK9 166 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 SOCS3O14543 225 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 TRAPPC3O43617 180 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 EIF4E2O60573 245 aaKnown RBP4.07□□□□□ -1.76
SND1-216ENST00000492840 PIGRP01833 764 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 HLA-HP01893 362 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 FGGP02679 453 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 FOXN2P32314 431 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 GCKP35557 465 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 CFHR2P36980 270 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 TFPI2P48307 235 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 ARPP19P56211 112 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 ERVK11-1P61568 191 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 LCN2P80188 198 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 NSUN5P1Q3KNT7 163 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 LINC00303Q3SY05 128 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 TRIM40Q6P9F5 258 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 MBOAT1Q6ZNC8 495 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 ACOT7LQ6ZUV0 252 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 COMTD1Q86VU5 262 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 ITPRIPQ8IWB1 547 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 PIANPQ8IYJ0 282 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 CMTM1Q8IZ96 169 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 INO80EQ8NBZ0 244 aaPredicted RBP4.07□□□□□ -1.76
SND1-216ENST00000492840 OR56A4Q8NGH8 313 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 LYPD6BQ8NI32 183 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 CA5BP1Q8WTZ4 195 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 NRBF2Q96F24 287 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 CSPG4P5Q96PW8 444 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 SORT1Q99523 831 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 SH3GL1Q99961 368 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 ECSITQ9BQ95 431 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 WACQ9BTA9 647 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 RNF126Q9BV68 326 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 ELOVL4Q9GZR5 314 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 TUBB1Q9H4B7 451 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 NXF3Q9H4D5 531 aaKnown RBP4.07□□□□□ -1.76
SND1-216ENST00000492840 NTN4Q9HB63 628 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 SPACA1Q9HBV2 294 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 PRSS16Q9NQE7 514 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 GIN1Q9NXP7 522 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 CTSZQ9UBR2 303 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 TMEM131Q92545 1883 aa4.07□□□□□ -1.76
SND1-216ENST00000492840 ANKHD1Q8IWZ3 2542 aaKnown RBP4.06□□□□□ -1.76
SND1-216ENST00000492840 OTOGQ6ZRI0 2925 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 ZNF638Q14966 1978 aaKnown RBP4.06□□□□□ -1.76
SND1-216ENST00000492840 IGKV1D-8A0A087WSZ0 117 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 SMIM28A0A1B0GU29 152 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 VPS37CA5D8V6 355 aaPredicted RBP4.06□□□□□ -1.76
SND1-216ENST00000492840 EFCAB7A8K855 629 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 SAP18O00422 153 aaKnown RBP4.06□□□□□ -1.76
SND1-216ENST00000492840 LAD1O00515 517 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 CYTH3O43739 400 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 KLF8O95600 359 aaPredicted RBP4.06□□□□□ -1.76
SND1-216ENST00000492840 IGHV2-5P01817 119 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 CCL2P13500 99 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 GABRR2P28476 465 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 SHMT2P34897 504 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 UGT1A3P35503 534 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 KIR2DS2P43631 304 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 NPBWR2P48146 333 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 IST1P53990 364 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 RPL32P62910 135 aaKnown RBP4.06□□□□□ -1.76
SND1-216ENST00000492840 SYCP1Q15431 976 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 CYTH1Q15438 398 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 IGFBP7Q16270 282 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 UBE2SQ16763 222 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 NHLRC3Q5JS37 347 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 FAM182AQ5T1J6 154 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 C6orf183Q5T699 404 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 LEMD1Q68G75 181 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 PDPK2PQ6A1A2 396 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 TTC23LQ6PF05 361 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 TMUB2Q71RG4 321 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 SKA3Q8IX90 412 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 NRMQ8IXM6 262 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 LIX1Q8N485 282 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 EID2Q8N6I1 236 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 ZNF564Q8TBZ8 553 aaPredicted RBP4.06□□□□□ -1.76
SND1-216ENST00000492840 SLC7A13Q8TCU3 470 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 DNASE2BQ8WZ79 361 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 ART5Q96L15 291 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 SYT11Q9BT88 431 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 KRTAP4-8Q9BYQ9 185 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 RANBP3Q9H6Z4 567 aaPredicted RBP4.06□□□□□ -1.76
SND1-216ENST00000492840 ZNF696Q9H7X3 374 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 PSTPIP2Q9H939 334 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 FOLH1BQ9HBA9 442 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 RETNQ9HD89 108 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 CHMP5Q9NZZ3 219 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 OR1A1Q9P1Q5 309 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 ARMCX1Q9P291 453 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 UXTQ9UBK9 157 aaPredicted RBP4.06□□□□□ -1.76
SND1-216ENST00000492840 HIVEP3Q5T1R4 2406 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 ZFHX3Q15911 3703 aa4.06□□□□□ -1.76
SND1-216ENST00000492840 LRRK1Q38SD2 2015 aa4.05□□□□□ -1.76
SND1-216ENST00000492840 TP53BP1Q12888 1972 aaPredicted RBP4.05□□□□□ -1.76
SND1-216ENST00000492840 PCSK5Q92824 1860 aa4.05□□□□□ -1.76
SND1-216ENST00000492840 KNL1Q8NG31 2342 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms