RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 SMARCD3Q6STE5 483 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 PEG10Q86TG7 708 aaKnown RBP7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 OR6V1Q8N148 313 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 SLC26A10Q8NG04 563 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 OR8G5Q8NG78 346 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 ZNF418Q8TF45 676 aaPredicted RBP7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 SLC7A6Q92536 515 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 FAM162AQ96A26 154 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 APOBEC3DQ96AK3 386 aaPredicted RBP7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 PYURFQ96I23 114 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 RSRC1Q96IZ7 334 aaKnown RBP7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 COQ7Q99807 217 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 SLC30A2Q9BRI3 323 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 C1QTNF5Q9BXJ0 243 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 NDEL1Q9GZM8 345 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 OCEL1Q9H607 264 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 GCM1Q9NP62 436 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 PNRC2Q9NPJ4 139 aaKnown RBP7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 ASH2LQ9UBL3 628 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 B9D1Q9UPM9 204 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 FAM32AQ9Y421 112 aaKnown RBP7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 IER3IP1Q9Y5U9 82 aa7.05□□□□□ -1.28
SMARCB1-207ENST00000491967 TMEM178BH3BS89 294 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 SOCS2O14508 198 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 TPD52L2O43399 206 aaKnown RBP7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 TIMM8AO60220 97 aaPredicted RBP7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 DBHP09172 617 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 WNT2P09544 360 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 PPIAL4GP0DN37 164 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 ZNF12P17014 697 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 TNFSF4P23510 183 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 CFPP27918 469 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 RBMXP38159 391 aaKnown RBP7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 GATA4P43694 442 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 RPS6KA3P51812 740 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 BTG1P62324 171 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 PAX8Q06710 450 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 HNRNPA0Q13151 305 aaKnown RBP7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 HLXQ14774 488 aaPredicted RBP7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 HSP90B2PQ58FF3 399 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 SLC27A4Q6P1M0 643 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 SHQ1Q6PI26 577 aaKnown RBP7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 SPICQ8N5J4 248 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 ZDHHC22Q8N966 263 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 GJC3Q8NFK1 279 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 OR2Z1Q8NG97 314 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 OR5L1Q8NGL2 311 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 POP5Q969H6 163 aaKnown RBP7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 TSSK2Q96PF2 358 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 JMJD8Q96S16 334 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 GAL3ST1Q99999 423 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 ELAC2Q9BQ52 826 aaKnown RBP7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 RBM4Q9BWF3 364 aaKnown RBP7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 HDHD2Q9H0R4 259 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 C7orf69Q9H7B7 122 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 IL1RAPQ9NPH3 570 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 ESM1Q9NQ30 184 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 MMP26Q9NRE1 261 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 EGFL7Q9UHF1 273 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 IL20RAQ9UHF4 553 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 CYB5R1Q9UHQ9 305 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 INSIG2Q9Y5U4 225 aa7.04□□□□□ -1.28
SMARCB1-207ENST00000491967 OR6C68A6NDL8 312 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 IQCF6A8MYZ5 107 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 TRIM77I1YAP6 450 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 SURF4O15260 269 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 DIRAS1O95057 198 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 PTBP3O95758 552 aaKnown RBP7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 GPANK1O95872 356 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 SBK2P0C263 348 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 ACSM4P0C7M7 580 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 OTX1P32242 354 aaPredicted RBP7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 MDH2P40926 338 aaKnown RBP7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 PMELP40967 661 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 MMP16P51512 607 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 LCN2P80188 198 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 ECH1Q13011 328 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 ZNF154Q13106 437 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 PCK2Q16822 640 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 FGD3Q5JSP0 725 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 KLF17Q5JT82 389 aaPredicted RBP7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 OTPQ5XKR4 325 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 ZNF770Q6IQ21 691 aaPredicted RBP7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 SLC18B1Q6NT16 456 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 C9orf139Q6ZV77 190 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 DOK3Q7L591 496 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 PIGWQ7Z7B1 504 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 PGAM4Q8N0Y7 254 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 KLHL36Q8N4N3 616 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 CELF2-AS1Q8N7Q2 184 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 OR13G1Q8NGZ3 307 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 OR52J3Q8NH60 311 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 ITLN1Q8WWA0 313 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 MEGF10Q96KG7 1140 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 ERMAPQ96PL5 475 aaPredicted RBP7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 OR2V2Q96R30 315 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 SUCNR1Q9BXA5 334 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 OR52D1Q9H346 318 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 TMEM165Q9HC07 324 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 KRCC1Q9NPI7 259 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms