RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 HCAR1Q9BXC0 346 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 PATZ1Q9HBE1 687 aaKnown RBP7.4□□□□□ -1.22
NUP50-217ENST00000491860 MSL2Q9HCI7 577 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 EMC7Q9NPA0 242 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 UBAP1Q9NZ09 502 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 ADA2Q9NZK5 511 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 NDUFAF4Q9P032 175 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 ASH2LQ9UBL3 628 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 OR5V1Q9UGF6 321 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 MAGEL2Q9UJ55 1249 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 KCNG2Q9UJ96 466 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 TMCC3Q9ULS5 477 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 LRCH1Q9Y2L9 728 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 TENM1Q9UKZ4 2725 aa7.4□□□□□ -1.23
NUP50-217ENST00000491860 DOCK11Q5JSL3 2073 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 LOC105371242A0A075B767 164 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 TMEM89A2RUT3 159 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 SOCS2O14508 198 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 GADD45GO95257 159 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 SBK2P0C263 348 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 PPIAL4GP0DN37 164 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 HSD17B1P14061 328 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 IRF2P14316 349 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 FPR3P25089 353 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 CFPP27918 469 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 NOS3P29474 1203 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 HIST1H3AP68431 136 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 LCN2P80188 198 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 SF3A3Q12874 501 aaKnown RBP eCLIP7.39□□□□□ -1.23
NUP50-217ENST00000491860 COX10Q12887 443 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 MALLQ13021 153 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 RFX4Q33E94 735 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 ARMCX4Q5H9R4 360 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 HIST2H3PS2Q5TEC6 136 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 BTNL3Q6UXE8 466 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 THSD4Q6ZMP0 1018 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 HIST2H3AQ71DI3 136 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 CELF2-AS1Q8N7Q2 184 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 C3orf56Q8N813 242 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 ATG16L2Q8NAA4 619 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 OR8G5Q8NG78 346 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 OR2AJ1Q8NGZ0 328 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 FANK1Q8TC84 345 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 PYURFQ96I23 114 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 C7orf34Q96L11 122 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 OR2V2Q96R30 315 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 CDADC1Q9BWV3 514 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 SLC22A4Q9H015 551 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 NUAK2Q9H093 628 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 RERGLQ9H628 205 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 DDX28Q9NUL7 540 aaKnown RBP7.39□□□□□ -1.23
NUP50-217ENST00000491860 MIOXQ9UGB7 285 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 COA3Q9Y2R0 106 aaPredicted RBP7.39□□□□□ -1.23
NUP50-217ENST00000491860 IER3IP1Q9Y5U9 82 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 AUP1Q9Y679 476 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 CACNG2Q9Y698 323 aa7.39□□□□□ -1.23
NUP50-217ENST00000491860 IQCF6A8MYZ5 107 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 TMEM178BH3BS89 294 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 KRT36O76013 467 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 FSHBP01225 129 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 SCG5P05408 212 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 NCK1P16333 377 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 ZNF12P17014 697 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 ZNF26P17031 533 aaPredicted RBP7.38□□□□□ -1.23
NUP50-217ENST00000491860 SLC6A9P48067 706 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 CENPAP49450 140 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 MNAT1P51948 309 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 RAD23AP54725 363 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 SPIBQ01892 262 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 MZT1Q08AG7 82 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 FOXL1Q12952 345 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 KCNJ8Q15842 424 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 CCDC92Q53HC0 331 aaPredicted RBP7.38□□□□□ -1.23
NUP50-217ENST00000491860 SAMD4BQ5PRF9 694 aaKnown RBP7.38□□□□□ -1.23
NUP50-217ENST00000491860 C1orf94Q6P1W5 598 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 C16orf89Q6UX73 402 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 LRRN1Q6UXK5 716 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 C1orf229Q6ZS94 237 aaPredicted RBP7.38□□□□□ -1.23
NUP50-217ENST00000491860 NLRC3Q7RTR2 1065 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 OR4C15Q8NGM1 316 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 ITLN1Q8WWA0 313 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 SPTSSAQ969W0 71 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 NSMCE2Q96MF7 247 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 ERMAPQ96PL5 475 aaPredicted RBP7.38□□□□□ -1.23
NUP50-217ENST00000491860 MYLK2Q9H1R3 596 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 GCM1Q9NP62 436 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 TRIM36Q9NQ86 728 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 TMEM100Q9NV29 134 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 ZNF446Q9NWS9 450 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 EGFL7Q9UHF1 273 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 NUP50Q9UKX7 468 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 STARD10Q9Y365 291 aa7.38□□□□□ -1.23
NUP50-217ENST00000491860 IGLV1-36A0A0B4J1U3 117 aa7.37□□□□□ -1.23
NUP50-217ENST00000491860 F5H0A9 414 aaPredicted RBP7.37□□□□□ -1.23
NUP50-217ENST00000491860 RER1O15258 196 aa7.37□□□□□ -1.23
NUP50-217ENST00000491860 KCNAB3O43448 404 aa7.37□□□□□ -1.23
NUP50-217ENST00000491860 OR10H3O60404 316 aa7.37□□□□□ -1.23
NUP50-217ENST00000491860 AVPP01185 164 aa7.37□□□□□ -1.23
NUP50-217ENST00000491860 FABP3P05413 133 aa7.37□□□□□ -1.23
NUP50-217ENST00000491860 ZNF823P16415 610 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms